CX043840

Overview
NameCX043840
Unique NameCX043840
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_XENLA (Transmembrane protein 205 OS=Xenopus laevis GN=tmem205 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26
Identity = 57/159 (35.85%), Postives = 93/159 (58.49%), Query Frame = -2
Query:  297 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNRE----VAKSNPKLAAMNKKFGMIHGLSSLANIM 761
            +K+ HLL  S +WG   W+TF+ G ++ K +PRH FG +QSK+FP Y  +V  C  I++A +A  HP +  S +E  Q+    ++          F+P+T + M + H +ERE ++G  VG + N+E    + + +PK  A+ K+F   HG+SSL N++
Sbjct:   11 VKIFHLLVLSASWGMQCWMTFVAGFVLIKGVPRHTFGLVQSKLFPYYNHIVLCCSFISLAIYAAYHPRELLSPSESVQISLFFTSLLVAALQARWFSPVTTKTMFKMHVIEREHSLGQGVGLSANKEGYQLLQEKDPKYKALRKRFMRYHGISSLCNLL 169          
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_XENTR (Transmembrane protein 205 OS=Xenopus tropicalis GN=tmem205 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = -2
Query:  297 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNRE----VAKSNPKLAAMNKKFGMIHGLSSLANIM 761
            ++  HLL  S +WG   W TF+ G ++ + +PRH FG +QSK+FP Y  +V  C  I++A +A  HP +  S +E  Q+            +   F+P+T + M + H +ERE ++G  VG + NRE    + + +PK  A+ ++F   HG+SSL N++
Sbjct:   11 VRTIHLLVLSASWGMQCWTTFVAGFVLIRGVPRHTFGLVQSKLFPFYNHIVLCCSFISLAIYAAYHPRELLSPSESVQITLFFVCLLAAALHARWFSPVTTKTMFKMHIIEREHSLGQGVGLSANREAYQRLQEKDPKYKALRQRFMRYHGISSLCNLL 169          
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_HUMAN (Transmembrane protein 205 OS=Homo sapiens GN=TMEM205 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.587e-24
Identity = 64/178 (35.96%), Postives = 90/178 (50.56%), Query Frame = -2
Query:  255 LSPFLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNREVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAG 773
            L   +K+ HLL  S AWG  +WVTF+ G ++F++LPRH FG +QSK+FP YF +   C  I +   A  H W   +  E  QL  L  +      N     P T   M     VE+E  +G EV     G    R++ + +PK +A+ + F   HGLSSL N+   G +  +   LAG
Sbjct:    7 LGGLIKMVHLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFINLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEVPGSHQGPDPYRQLREKDPKYSALRQNFFRYHGLSSLCNL---GCVLSNGLCLAG 181          
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_PONAB (Transmembrane protein 205 OS=Pongo abelii GN=TMEM205 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = -2
Query:  255 LSPFLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNREVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAG 773
            L   +K+ HLL  S AWG  +WVTF+ G ++F++LPRH FG +QSK+FP YF +   C  + +   A  H W   +  E  QL  L  +      N     P T   M     VE+E  +G EV     G    R++ + +PK +A+ + F   HGLSSL N+   G +  +   LAG
Sbjct:    7 LGGLIKMVHLLVLSGAWGMQMWVTFVSGFLLFRSLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQHAWAQLTFWEASQLYLLFLSLTLATVNARWLEPRTTAAMWALQTVEKERGLGGEVPGSHQGPDPYRQLREKDPKYSALRQNFFRYHGLSSLCNL---GCVLSNGLCLAG 181          
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_MOUSE (Transmembrane protein 205 OS=Mus musculus GN=Tmem205 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.240e-22
Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = -2
Query:  300 LKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNREVAKSNPKLAAMNKKFGMIHGLSSLANI 761
            +K+ HLL  S AWG  +WVTFI G ++F++LPRH FG +QSK+FP YF +   C  I +   A    W   +  E  QL  LL +      N       T  +M+    +E+E  +G EV     G    R++   +PK +A+ +KF   HGLSSL N+
Sbjct:   11 IKVIHLLVLSGAWGMQVWVTFISGFLLFRSLPRHTFGLVQSKVFPVYFHVSLGCAFINLCILAPQRAWIHLTLWEVSQLSLLLLSLTLATINARWLEARTTAVMRALQSIEKERGLGTEVPGNFQGPDPYRQLRDKDPKYSALRRKFYHYHGLSSLCNL 169          
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_BOVIN (Transmembrane protein 205 OS=Bos taurus GN=TMEM205 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.791e-21
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = -2
Query:  255 KLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEV-----GWTKNREVAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLAG 758
            K+ HLL  S AWG  +WVTFI G ++F+ LPRH FG +QSK+FP YF +   C  + +   A    W   +  E  QL  LL +      N       T   M     VE+E  +G EV     G     ++   +PK +A+ ++F   HGLSSL N+   G L  +  +LAG
Sbjct:   12 KVVHLLVLSGAWGMQMWVTFISGFVLFRGLPRHTFGLVQSKLFPFYFHISMGCAFVNLCILASQCSWAQLTFWEASQLFLLLLSLTLATINARWLESRTTAAMWALQTVEKERGLGGEVPGSHQGSDPYHQLRGQDPKYSALRQQFFRYHGLSSLCNL---GCLLSNGLHLAG 181          
BLAST of CX043840 vs. ExPASy Swiss-Prot
Match: TM205_DANRE (Transmembrane protein 205 OS=Danio rerio GN=tmem205 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.339e-21
Identity = 56/173 (32.37%), Postives = 89/173 (51.45%), Query Frame = -2
Query:  258 FLKLAHLLCFSTAWGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFSLVGVCCSIAVASFAYLHPWKSSSTAEKYQLGFLLSAFAFNLTNLFVFTPMTIEMMKQRHKVEREENIGDEVGWTKNRE----VAKSNPKLAAMNKKFGMIHGLSSLANIMSFGSLAMHSWYLA 764
            F+K+ HLL  S  WG  +WV+FI G ++   +  H FG +QSK+FP YF  +    ++++A +A  HP +     E  Q+     A      N   F P   E M    ++E+E  +G++VG + NRE    + + +PK       F   HGLS+L N++ F  + ++  YLA
Sbjct:   10 FVKVLHLLVISFTWGMQVWVSFIAGFVLISQVSMHTFGLVQSKLFPVYFYCLLGGNAVSLAVYAVYHPRELLDWHEGIQMSLFFVAVIMAGLNAQWFGPSATENMLVMQEIEKEHGLGNQVGMSSNREGYTKLREQDPKYKEHRSTFYRYHGLSNLCNLIGFFCITVNLIYLA 182          
The following BLAST results are available for this feature:
BLAST of CX043840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TM205_XENLA4.118e-2635.85Transmembrane protein 205 OS=Xenopus laevis GN=tme... [more]
TM205_XENTR3.855e-2434.59Transmembrane protein 205 OS=Xenopus tropicalis GN... [more]
TM205_HUMAN8.587e-2435.96Transmembrane protein 205 OS=Homo sapiens GN=TMEM2... [more]
TM205_PONAB1.122e-2335.39Transmembrane protein 205 OS=Pongo abelii GN=TMEM2... [more]
TM205_MOUSE1.240e-2237.11Transmembrane protein 205 OS=Mus musculus GN=Tmem2... [more]
TM205_BOVIN1.791e-2135.84Transmembrane protein 205 OS=Bos taurus GN=TMEM205... [more]
TM205_DANRE2.339e-2132.37Transmembrane protein 205 OS=Danio rerio GN=tmem20... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_13G05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13G05-N9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043840 ID=CX043840; Name=CX043840; organism=Citrus sinensis; type=EST; length=816bp
CCCCCCTCTTTTTTTTTTTTTTTTAAATCATGTGATCCTCTCAAACTTTA
TTTCATTCAATTAAAGAGAGTAAATTCCATATAATGACATATAGTGAATT
ATACATAAGATATAGTGAATTATACATAAGTTGCACATTCCCCAATACAG
AGTACAAAGTCAATGCATCATGTATGATTAAGTGAACCAGCGTCCCAAAT
ATCCAAATGAAGGGATATGGAGATGAAATTCTGATAAAGTTAAAGATTGA
TCTTACCAGCCAAATACCAAGAGTGCATGGCAAGGCTGCCAAATGACATG
ATATTAGCAAGGGATGATAATCCATGAATCATTCCAAACTTCTTATTCAT
CGCTGCAAGCTTTGGGTTAGACTTTGCAACTTCCCTGTTCTTTGTCCACC
CAACTTCATCTCCAATGTTCTCTTCTCTCTCCACTTTGTGCCTTTGCTTC
ATCATCTCAATGGTCATGGGTGTGAAGACAAACAAATTGGTGAGATTGAA
AGCAAAAGCAGAGAGTAGGAAGCCGAGCTGGTACTTTTCAGCAGTGGATG
ATGACTTCCACGGATGCAGATATGCAAATGATGCAACAGCTATTGAACAG
CACACTCCTACTAGCGAAAAATATGCTGGAAACATCTTGCTTTGTAGATT
ACCAAACTGATGCCTTGGTAGGTTCTTGAACATGATGATGCCGCCGATGA
AGGTGACCCAAAGAGCTGCGCCCCAAGCAGTGGAGAAGCAGAGGAGATGA
GCCAGCTTCAGGAAGGGCGATAGCTTGGATGAATTAAGGCCGTCCGATTT
TGATCCAAATGTCTCA
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