CX043833

Overview
NameCX043833
Unique NameCX043833
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8474 contig Csv1_Contig8474:155..958. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.434e-39
Identity = 110/276 (39.86%), Postives = 150/276 (54.35%), Query Frame = 1
Query:    1 SFTRFPILCVQTLMGFESTKHQQHIHLMSALVNKSIAETKL--PTSYFSNFSSQLLAKDFQGVR----AVTDHCEEMMSMSLKRLEKSLLALQNSPTKN--KHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAASGNRFVIYVKAGVYKEKIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            S T++  LCVQ L  F        +  +S LVNK+I+++ L  P    S  SS+L++ +         +V+D CE +M MS +RL +++ AL  S  K   KHD+QTWL AA+TFQQ CKDS+   G S+    I  ISQKMD+LS+L SN L LV+ I +   PK          +    P WV+A  R+LL   R  A+V+VA+DG+G+YRTV EA++AA GN                           GK  T+I GDD+A  GTS+P TAT
Sbjct:   40 SSTKYTSLCVQNLREFRHGS-LDGLDFVSFLVNKTISDSNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMSTRRLRQAMEALNGSSRKRHTKHDVQTWLSAAMTFQQACKDSILDSGGSSSASAISHISQKMDHLSRLVSNSLTLVDTIMKNPKPKT---------KSTALPRWVTAGERRLL-VGRARAHVVVAKDGSGDYRTVMEAVTAAHGN---------------------------GKDLTVIVGDDSATGGTSVPDTAT 277          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.890e-26
Identity = 78/219 (35.62%), Postives = 123/219 (56.16%), Query Frame = 1
Query:  202 CEEMMSMSLKRLEKSLLALQNSPTKNK-----HDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALV-NRID-------RASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            C E M  +L  L  ++  L+  P K        D++T + +A+T Q+TC D  +     A  +V K + +   ++ ++ SN LA++ N  D       + S P N   NR+L E+ G++P W+SA +R+LLQ+  +  +V+VA DG+G+Y+TVSEA+  A   S  R+VI +KAGVY+E +     K  I  +GDGK  TIIT   N + G++   +AT
Sbjct:  139 CLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHD--EADKKVRKVLLKGQKHVEKMCSNALAMICNMTDTDIANEMKLSAPAN---NRKLVEDNGEWPEWLSAGDRRLLQSSTVTPDVVVAADGSGDYKTVSEAVRKAPEKSSKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSAT 352          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.175e-25
Identity = 89/269 (33.09%), Postives = 138/269 (51.30%), Query Frame = 1
Query:    7 TRFPILCVQTLMGF------ESTKHQQHIHLMSALVNKSIAETKLPTSYFSNFSSQLLAKDFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRI-DRASYPKNSTYNRRL---DEEQGDFPNWVSAKNRKLLQAP--RINANVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKE---KIRTNKDGITLIGDGKYTTIITG 759
            TRFP LCV +LM F       S+K   H+ +   L + S A     +  F +   +         R+  D C E++  S+  L ++L ++ +S  K + D+ TWL AALT   TC +  + +       V   ++  +  LS+L SN LA+ +   D   +      NRRL   +E +  FP W+  K R++L+ P  +I A++IV++DG G  +T+SEAI  A  N   R +IYVKAG Y+E   K+   K  +  +GDGK  T+I+G
Sbjct:   94 TRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASLSFVDMPPR--------ARSAYDSCVELLDDSVDALSRALSSVVSSSAKPQ-DVTTWLSAALTNHDTCTEGFDGVDDGG---VKDHMTAALQNLSELVSNCLAIFSASHDGDDFAGVPIQNRRLLGVEEREEKFPRWMRPKEREILEMPVSQIQADIIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISG 350          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.833e-25
Identity = 79/211 (37.44%), Postives = 117/211 (55.45%), Query Frame = 1
Query:  184 RAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQA-PRINANVIVAQDGTGNYRTVSEAISAAS---GNRFVIYVKAGVYKEKIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            +A  + C E+  +++ +L ++     +SP   K D QTWL  ALT  +TC+ S+  LG+     V+  +S  +   ++L SN L+L N++          YN      +  FP WV   +RKLLQ  PR  AN++VAQDG+GN +T+ EA++AAS   G+R+VIY+KAG Y E I      I  +GDG   TIITG  +   G +   +AT
Sbjct:   92 KAAWEDCRELYELTVLKLNQTS---NSSPGCTKVDKQTWLSTALTNLETCRASLEDLGVP--EYVLPLLSNNV---TKLISNTLSL-NKVP---------YNE--PSYKDGFPTWVKPGDRKLLQTTPR--ANIVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTYNENIEVKLKNIMFVGDGIGKTIITGSKSVGGGATTFKSAT 280          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.618e-25
Identity = 77/212 (36.32%), Postives = 122/212 (57.55%), Query Frame = 1
Query:  202 CEEMMSMSLKRLEKSLLALQ--NSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAP----RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            CEEMM +S  R+  S+  L+  N   ++  ++ TWL + LT   TC +S++ + ++++ +++K   Q  D +S+        V+ +      K    NR        FP+W++A +RKLL++     ++ ANV+VA+DGTG ++TV+EA++AA   S  R+VIYVK GVYKE   I   K  + L+GDGK  TIITG  N   G++   +AT
Sbjct:  126 CEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSK-QIVKP--QLEDLVSRARVALAIFVSVLPARDDLKMIISNR--------FPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSAT 326          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 78/209 (37.32%), Postives = 111/209 (53.11%), Query Frame = 1
Query:  169 DFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKH------DIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGD 762
            DF+   A++D C +++  S   L  SL A QN   KN        D++TWL AAL  Q TC +     G    N +++ +      L Q+TS    LV  +    +P     N       G  P+WV  K+RKLLQA  ++ + IVAQDGTGN+  V++A+ AA   S  R+VIY+K G YKE  +I+  K  + +IGDG   TII+G+
Sbjct:   83 DFRLANAISD-CLDLLDFSADELNWSLSASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSN-----GFEGTNSIVQGLISAG--LGQVTS----LVQELLTQVHP-----NSNQQGPNGQIPSWVKTKDRKLLQADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGN 274          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 83/282 (29.43%), Postives = 136/282 (48.23%), Query Frame = 1
Query:    1 SFTRFPILCVQTLMGFESTKHQQHIHLMSALVNKSIAETKLPTSYFSNFSSQLLAKDFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNK-----HDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALV-NRIDRASYPKNSTYNRRLDEEQGD---FPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            S TR+P LC   +        +         ++ +I  T +  +YF            +  +     C E +  +L  L K++  L+  P K        D++T + AA+T Q TC D  +     A   V   +S    ++ ++ SN LA++ N  D       ++ NR+L EE      +P W+S  +R+LLQ+  +  NV+VA DG+GN++TV+ +++AA      R++I +KAGVY+E +   K    I  IGDG+  TIITG  N   G++   +AT
Sbjct:   74 SSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHD--DANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSSVTPNVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSAT 353          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 83/282 (29.43%), Postives = 135/282 (47.87%), Query Frame = 1
Query:    1 SFTRFPILCVQTLMGFESTKHQQHIHLMSALVNKSIAETKLPTSYFSNFSSQLLAKDFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNK-----HDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALV-NRIDRASYPKNSTYNRRLDEEQGD---FPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            S TR+P LC   +        +         ++ +I  T +  +YF            +  +     C E +  +L  L K++  L+  P K        D++T + AA+T Q TC D  +     A   V   +S    ++ ++ SN LA++ N  D       ++ NR+L EE      +P W+S  +R+LLQ+  +  N +VA DG+GN++TV+ A++AA      R++I +KAGVY+E +   K    I  IGDG+  TIITG  N   G++   +AT
Sbjct:   74 SSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHD--DANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSAT 353          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 76/208 (36.54%), Postives = 116/208 (55.77%), Query Frame = 1
Query:  184 RAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKHDIQTWLGAALTFQQTCKDSVNSLGLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAASGN-RFVIYVKAGVYKEKIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            +A  + C ++  +++ ++ +++     +   +K D QTWL  ALT   TC+     LG++  + V+  +S  +   S L  N LA +N++     P N T       E+  FP+WV   +RKLLQ+     N +VA+DG+GN++T+ EAI AASG+ RFVIYVK GVY E +   K  + L GDG   TIITG  +   GT+   +AT
Sbjct:   94 KAAWEDCIKLYDLTVSKINETM---DPNVKCSKLDAQTWLSTALTNLDTCRAGFLELGVT--DIVLPLMSNNV---SNLLCNTLA-INKV-----PFNYT-----PPEKDGFPSWVKPGDRKLLQSSTPKDNAVVAKDGSGNFKTIKEAIDAASGSGRFVIYVKQGVYSENLEIRKKNVMLRGDGIGKTIITGSKSVGGGTTTFNSAT 282          
BLAST of CX043833 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.216e-24
Identity = 86/278 (30.94%), Postives = 141/278 (50.72%), Query Frame = 1
Query:   13 FPILCVQTLMGFESTKHQQHIHLMSALVNKSIAETKLPTSYFSNFSSQLLAKDFQGVRAVTDHCEEMMSMSLKRLEKSLLALQNSPTKNKH-DIQTWLGAALTFQQTCKDSVNSL---GLSARNEVIKKISQKMDYLSQLTSNPLALVNRIDRASYPKNSTYNRRL--DEEQGDFPNWVSAKNRKLLQAPR--INANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE---KIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTAT 804
            +P LC+ TL+ F  +       L+    N ++   K   + +++ S+    +    VR+  D C E++  S+  L ++L ++        H D+ TWL +A+T   TC D  + +   G   +++VI  +      LS++ SN LA+     +         NR+L   EE  + PNW+  ++R+LL  P   I A++ V++DG+G ++T++EAI  A   S  RFVIYVKAG Y+E   K+   K  +  IGDGK  T+ITG  +     +   TAT
Sbjct:   84 YPNLCIDTLLDFPGSLTADENELIHISFNATLQ--KFSKALYTS-STITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESHSDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKD----LSEMVSNCLAIFAGKVKDLSGVPVVNNRKLLGTEETEELPNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTAT 354          
The following BLAST results are available for this feature:
BLAST of CX043833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PME54_ARATH5.434e-3939.86Probable pectinesterase/pectinesterase inhibitor 5... [more]
PMEU1_SOLLC6.890e-2635.62Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME34_ARATH1.175e-2533.09Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME2_CITSI5.833e-2537.44Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME18_ARATH7.618e-2536.32Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME_PRUPE1.299e-2437.32Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME3_CITSI1.299e-2429.43Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI1.299e-2429.43Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME17_ARATH1.299e-2436.54Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME61_ARATH2.216e-2430.94Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13G01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13G01-N1-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043833 ID=CX043833; Name=CX043833; organism=Citrus sinensis; type=EST; length=804bp
AGCTTCACTAGATTCCCAATCCTTTGTGTCCAGACATTGATGGGGTTTGA
GAGTACAAAACATCAACAACACATCCATCTTATGTCTGCTCTCGTTAACA
AAAGCATTGCTGAAACCAAGCTGCCTACTTCATATTTTTCTAATTTCAGC
TCCCAGTTACTTGCCAAAGATTTCCAAGGTGTACGTGCTGTCACAGATCA
CTGCGAAGAGATGATGAGTATGTCACTCAAACGGCTAGAGAAGTCACTAT
TAGCCCTACAAAATTCCCCAACAAAAAACAAGCATGACATCCAAACGTGG
CTCGGCGCTGCGTTGACTTTCCAGCAAACTTGTAAAGACTCTGTGAATAG
CCTCGGTCTCTCAGCGAGAAATGAGGTTATCAAAAAAATATCTCAAAAAA
TGGATTATTTGTCTCAACTGACCAGTAATCCTTTAGCCCTTGTCAACAGG
ATAGACAGGGCTAGTTACCCAAAGAACAGCACATATAATCGGCGTCTAGA
TGAGGAACAAGGTGATTTTCCCAACTGGGTATCGGCGAAAAATAGGAAAC
TGCTGCAGGCCCCGCGCATAAATGCAAATGTGATTGTGGCTCAAGATGGA
ACTGGCAATTATAGAACTGTTTCGGAAGCTATCAGTGCTGCTTCTGGAAA
TCGTTTTGTGATTTATGTGAAGGCAGGTGTTTATAAGGAGAAAATTCGAA
CTAACAAGGACGGTATTACTTTGATAGGAGATGGCAAATACACTACTATT
ATTACTGGTGATGATAATGCTCGTAGAGGCACTTCCATGCCTGGCACCGC
CACT
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