DC900385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.230e-21 Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 118 FDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 F+KFS L +IEK IN RNKD +LK R GAG+PPYELLLP+S GVTGRGIPNSISI Sbjct: 861 FNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917 HSP 2 Score: 36.1946 bits (82), Expect = 3.230e-21 Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 2 Query: 35 THSPDEEYLGQVNQLHSHWINDPEV 109 THSPDEEYL ++ ++ HW D +V Sbjct: 833 THSPDEEYLIELREVQRHWFQDEQV 857
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.375e-16 Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 109 LNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 ++ F FSA + IEK I+ RN+D + RCGAG+ PYEL+ PSS PGVT RG+PNS+SI Sbjct: 867 VDAFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926 HSP 2 Score: 31.5722 bits (70), Expect = 7.375e-16 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 35 THSPDEEYLGQVNQLHSHWINDPEV 109 THSPDEEY+G+ Q S W D E+ Sbjct: 843 THSPDEEYIGE-RQQPSIWTGDAEI 866
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.591e-16 Identity = 38/57 (66.67%), Postives = 42/57 (73.68%), Query Frame = 1 Query: 118 FDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 F+KFS L+E E I+ RN + K RCGAGI PYELL P S PGVTGRGIPNSISI Sbjct: 840 FEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896 HSP 2 Score: 26.9498 bits (58), Expect = 9.591e-16 Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 35 THSPDEEYLGQVNQLHSHWINDPEV 109 +HSPDEEY+G+ + W+ +P V Sbjct: 814 SHSPDEEYMGEYAE--PAWLAEPMV 836
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.733e-15 Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 118 FDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 F F+A + IEK I RN D + RCGAG+ PYELL+PSS PGVT RG+PNS+SI Sbjct: 863 FYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919 HSP 2 Score: 31.5722 bits (70), Expect = 2.733e-15 Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 2 Query: 35 THSPDEEYLGQVNQLHSHWINDPEV 109 THSPDEEY+G+ Q S W D E+ Sbjct: 836 THSPDEEYIGE-RQQPSIWTGDAEI 859
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.745e-14 Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 118 FDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 +D F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 868 YDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924 HSP 2 Score: 21.9422 bits (45), Expect = 3.745e-14 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 35 THSPDEEYLG 64 +HS DEEYLG Sbjct: 842 SHSTDEEYLG 851
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 6.320e-14 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 127 FSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 F+A++ E+ I RN D K RCGAG+ PYELL PSS PGVT RG+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918 HSP 2 Score: 27.335 bits (59), Expect = 6.320e-14 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 35 THSPDEEYLGQ 67 THSPDEEYLG+ Sbjct: 833 THSPDEEYLGE 843
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.205e-14 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 127 FSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 F+A L+EIE +I+ RNKD +LK RCGAGI PY+L+ P S GVTG GIPNS SI Sbjct: 888 FTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941 HSP 2 Score: 23.483 bits (49), Expect = 8.205e-14 Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 35 THSPDEEYLG 64 THS DEEYLG Sbjct: 859 THSTDEEYLG 868
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.036e-13 Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 118 FDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 F++F L+ +E +I+ RN + LK R GAG+ YELL P+S GVTG G+P SISI Sbjct: 840 FERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896 HSP 2 Score: 32.7278 bits (73), Expect = 3.036e-13 Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 2 Query: 35 THSPDEEYLGQVNQLHSHWINDPEV 109 THSPDEEY+G+ Q + W N+P + Sbjct: 814 THSPDEEYIGE--QQEASWANEPVI 836
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.649e-13 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1 Query: 100 P*SLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 P +L +F+A++ E+ I RN D + RCGAG+ PYEL+ PSSGPG+T RG+PNS++I Sbjct: 837 PAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899 HSP 2 Score: 25.409 bits (54), Expect = 6.649e-13 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 35 THSPDEEYLGQVNQLHSHWINDP 103 THS DEEYLG+ + W DP Sbjct: 817 THSADEEYLGE--RPDEAWTADP 837
BLAST of DC900385 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.378e-12 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 106 SLNMFDKFSANLEEIEKIINTRNKDFRLKGRCGAGIPPYELLLPSSGPGVTGRGIPNSISI 288 +L F+KF ++EIEK I+ RN D LK R G PY LL PSS GVTGRGIPNS+SI Sbjct: 799 ALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859 HSP 2 Score: 22.7126 bits (47), Expect = 5.378e-12 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2 Query: 35 THSPDEEYLGQ 67 THS DE YLGQ Sbjct: 777 THSSDEVYLGQ 787 The following BLAST results are available for this feature:
BLAST of DC900385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900385 ID=DC900385; Name=DC900385; organism=Citrus sinensis; type=EST; length=556bpback to top |