CX043820

Overview
NameCX043820
Unique NameCX043820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.515e-56
Identity = 90/118 (76.27%), Postives = 103/118 (87.29%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            D DF ELY FKWT+LLIPPTTVLI+N+VG+VAG+S AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPF    TK     +CGINC
Sbjct:  910 DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVL-KTKGPDTSKCGINC 1026

HSP 2 Score: 42.3578 bits (98), Expect = 1.515e-56
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = -1 
Query:  723 LFISIFATGILEIRWSGVGIED*WR 797
            LF+SI  TGILE+RWSGV IE+ WR
Sbjct:  845 LFMSIIVTGILELRWSGVSIEEWWR 869
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.796e-56
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DGDFAELYVFKWTSLLIPPTTVL++NLVG+VAG+S+AINSGYQSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S   KA + GQCG+NC
Sbjct:  959 DGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.796e-56
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DGDFAELYVFKWTSLLIPPTTVL++NLVG+VAG+S+AINSGYQSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S   KA + GQCG+NC
Sbjct:  959 DGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.054e-54
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  976 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1092

HSP 2 Score: 47.7506 bits (112), Expect = 1.054e-54
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = -1 
Query:  723 LFISIFATGILEIRWSGVGIED*WR 797
            LFI IFATGILE+RWSGVGI+D WR
Sbjct:  911 LFICIFATGILEMRWSGVGIDDWWR 935
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.054e-54
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091

HSP 2 Score: 47.7506 bits (112), Expect = 1.054e-54
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = -1 
Query:  723 LFISIFATGILEIRWSGVGIED*WR 797
            LFI IFATGILE+RWSGVGI+D WR
Sbjct:  910 LFICIFATGILEMRWSGVGIDDWWR 934
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.054e-54
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091

HSP 2 Score: 47.7506 bits (112), Expect = 1.054e-54
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = -1 
Query:  723 LFISIFATGILEIRWSGVGIED*WR 797
            LFI IFATGILE+RWSGVGI+D WR
Sbjct:  910 LFICIFATGILEMRWSGVGIDDWWR 934
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.968e-54
Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A +NG    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNNGPLLEECGLDC 1091

HSP 2 Score: 43.8986 bits (102), Expect = 3.968e-54
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = -1 
Query:  723 LFISIFATGILEIRWSGVGIED*WR 797
            LFI IF TGILE+RWSGV I+D WR
Sbjct:  910 LFICIFVTGILEMRWSGVAIDDWWR 934
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.800e-53
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DGDFAELY+FKWT+LLIPPTT+LIVNLVG+VAGVS+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VWS+LLASIFSLLWVR+DPFTS  T  +   +CGINC
Sbjct:  949 DGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDIL-ECGINC 1065
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53
Identity = 95/118 (80.51%), Postives = 109/118 (92.37%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DGDFAELY+FKWT+LLIPPTT+LI+NLVG+VAG+S+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+  T  ++   CGINC
Sbjct:  965 DGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-TCGINC 1081
[Close]
BLAST of CX043820 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.106e-52
Identity = 94/118 (79.66%), Postives = 110/118 (93.22%), Query Frame = -2 
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            +GDFAELY+FKWT+LLIPPTT+LI+NLVG+VAG+S+AINSGYQSWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV+VW+ILLASIFSLLWVR+DPFT+  T  ++  +CGINC
Sbjct:  957 EGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQ-KCGINC 1073
The following BLAST results are available for this feature:
BLAST of CX043820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CESA7_ARATH1.515e-5676.27Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA1_ORYSJ4.796e-5684.75Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI4.796e-5684.75Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA3_ORYSJ1.054e-5472.13Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA5_ORYSJ1.054e-5472.13Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI1.054e-5472.13Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA6_ORYSJ3.968e-5472.95Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA3_ARATH3.800e-5383.05Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA8_ORYSJ6.482e-5380.51Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA2_ORYSJ1.106e-5279.66Probable cellulose synthase A catalytic subunit 2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13F05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13F05-L9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043820 ID=CX043820; Name=CX043820; organism=Citrus sinensis; type=EST; length=797bp
TTTTTTTTTTTTTTTTTGAGGATTACATTGTTTCTTAGCGCTCTGAACTT
GAGAAAATGGAGCTTCACAACTTAGGTCCAACACAACTAAACAAGTAGGG
ACCAACATCAAGCATCTGTATGGAAGTTACAAAACGATATAAGAATAAAT
ATTAAATAAGATACAAAAAGGGTTTTACTAAAGCCTCAAGTCCTCCTTAG
TAGGCTCCACGACAAATGAAAAGATCCCATATCATCAAACTCCTTTCTCC
AGACCGACGAGAAGTAAATTAACTTACGATCATTTCCCAATGACATAATT
TCTTCTTATATACACTGATGAGAGCTTGAAGGAAGAATGGCATTTGAAGC
CACAAATAATCATCCAACATGCACTAGCAATTGATGCCACATTGACCGTT
TGAATTGGCTTTGGTGTCATCAGAGGTAAAGGGATCAACACGCACCCACA
GCAAGGAGAAAATGGAAGCAAGTAGGATAGACCACACAATGACAATTGTT
GGTGTGCGGTTTTGACGACCCAACAGACCCTTCAGGAAAGGATACAGATG
GGCAATGACCCATATGGCAAAGAATAGCTTGCCAAAGAGTGGACCCCATG
ATTGGTAACCACTGTTTATGGCCCATGATACACCAGCTACAATACCCACC
AAGTTCACAATCAGGACTGTAGTTGGAGGGATGAGAAGAGATGTCCATTT
GAATACATAAAGCTCTGCAAAATCTCCATCAGTCCTCAATACCAACCCCA
CTCCATCTAATCTCCAGTATTCCAGTAGCAAAAATGGAAATGAAAAG
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