CX043788

Overview
NameCX043788
Unique NameCX043788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3600 contig Csv1_Contig3600:1..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043788 vs. ExPASy Swiss-Prot
Match: BCAL2_ARATH (Branched-chain-amino-acid aminotransferase-like protein 2 OS=Arabidopsis thaliana GN=At5g27410 PE=2 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 7.363e-96
Identity = 159/223 (71.30%), Postives = 196/223 (87.89%), Query Frame = 3
Query:   81 IEVIHSWSAPRSLSTSLMYSFAQRDDMEVLDEPLYPAFLRVTGFDRPYGEEILSKIESDGNKVVKEVIFGPGAKKYRYCKHMAKQRLPGLPDDLMKKGKHIILIRNPLDILPSFDKVVPPSFKELGLADLVTIYSELCELGKSPVIVDAADLQQDPEATLRSLCEDLDIPFQATMLRWEAGPKPIDGLWAKWWYESVHKSTGFTSAREYPMPFPMSLYDLLEQ 749
            +EVIH+WSAPRSLST+LMYSFAQRDD+EVLDEPLY AFL+ TG DRPY +E+LSK+E DG KVVK++I+GPG KKYR+CKH++KQRL GLP +LM +GKH ILIRNPL+ILPSF+K+ P SF ELGL +LV+IYS+LC++G  P I+DA +LQ+DPEATLRSLC+DL+IPFQA+ML+WEAGP P DGLWA WWYE++HKSTGF+S ++YP  FP+  YDLLEQ
Sbjct:    1 MEVIHAWSAPRSLSTTLMYSFAQRDDIEVLDEPLYAAFLKSTGVDRPYKDELLSKMECDGEKVVKDIIYGPGKKKYRFCKHISKQRLLGLPSELMSEGKHFILIRNPLNILPSFEKIHPSSFHELGLGELVSIYSDLCQMGTPPAIIDADELQRDPEATLRSLCDDLEIPFQASMLKWEAGPIPEDGLWAPWWYETLHKSTGFSSPQKYPQTFPLMHYDLLEQ 223          
BLAST of CX043788 vs. ExPASy Swiss-Prot
Match: BCAL1_ARATH (Branched-chain-amino-acid aminotransferase-like protein 1 OS=Arabidopsis thaliana GN=At3g05190 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.814e-94
Identity = 158/225 (70.22%), Postives = 196/225 (87.11%), Query Frame = 3
Query:   78 EIEVIHSWSAPRSLSTSLMYSFAQRDDMEVLDEPLYPAFLRVTGFDRPYGEEILSKIESDGNKVVKEVIFGPGAKKYRYCKHMAKQRLPGLPDDLMKKGKHIILIRNPLDILPSFDKVVPPSFKELGLADLVTIYSELCELGKSPVIVDAADLQQDPEATLRSLCEDLDIPFQATMLRWEAGPKPIDGLWAKWWYESVHKSTGFTSAREYPMPFPMSLYDLLEQS 752
            E EVIHSWSAPRSLSTSLMYSFAQR D EV+DEPLY +FL+ TGFDRPY +E+LSK+E +G KVVK+VI+G G+KKYRYCKH++KQRL GLP +LM +GKH ILIRNPL+ILPSF+KV PPSF ELGL +LV+IYS+LC++G  P ++DA +LQ+DPE TLR LC+DL+IPFQA+ML+W+AGP P DG+WA WWY+SVH+STGF+S ++YP  FP+S YDLLE+S
Sbjct:    3 EPEVIHSWSAPRSLSTSLMYSFAQRLDTEVVDEPLYASFLKATGFDRPYRDEVLSKMECNGEKVVKDVIYGSGSKKYRYCKHISKQRLFGLPSELMSRGKHFILIRNPLNILPSFEKVHPPSFLELGLGELVSIYSDLCQMGTPPAVIDADELQRDPETTLRGLCDDLEIPFQASMLKWKAGPIPEDGVWAPWWYKSVHESTGFSSPKKYPRTFPLSHYDLLERS 227          
The following BLAST results are available for this feature:
BLAST of CX043788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BCAL2_ARATH7.363e-9671.30Branched-chain-amino-acid aminotransferase-like pr... [more]
BCAL1_ARATH1.814e-9470.22Branched-chain-amino-acid aminotransferase-like pr... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_13D08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D08-H15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043788 ID=CX043788; Name=CX043788; organism=Citrus sinensis; type=EST; length=753bp
CCACCTCAAAACTCTCATAAGAGTTGACGATTGTCATTCATCAGCATCAG
CATCATCATCAAGAAATGGCGGAGCAAGAGATAGAGGTGATCCACTCGTG
GTCTGCCCCAAGATCACTCAGTACCAGCCTCATGTACTCTTTTGCTCAGA
GGGATGACATGGAAGTGCTTGATGAACCTCTCTATCCAGCTTTTCTTCGG
GTGACAGGGTTTGATCGGCCCTACGGAGAGGAGATTCTATCCAAAATTGA
ATCTGATGGAAATAAGGTTGTAAAAGAGGTCATTTTTGGTCCAGGAGCGA
AGAAATATCGGTATTGCAAGCATATGGCAAAACAACGATTACCTGGTTTG
CCAGATGATTTAATGAAGAAAGGGAAGCACATTATATTGATACGGAATCC
TCTTGACATACTGCCATCATTTGATAAGGTTGTGCCTCCATCCTTTAAGG
AGCTGGGTTTGGCAGACCTGGTCACCATTTACAGCGAGCTCTGTGAGCTG
GGAAAAAGTCCAGTTATAGTCGATGCAGCAGACCTTCAACAAGATCCTGA
GGCCACTTTACGCAGTCTTTGTGAAGACTTGGATATCCCTTTTCAAGCCA
CAATGCTGAGATGGGAAGCTGGTCCAAAACCAATAGATGGCCTTTGGGCT
AAGTGGTGGTATGAAAGTGTACATAAATCTACAGGTTTCACATCAGCAAG
AGAGTATCCCATGCCATTTCCTATGTCTCTTTACGATTTGCTGGAGCAAA
GTC
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