CX043787

Overview
NameCX043787
Unique NameCX043787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3599 contig Csv1_Contig3599:1..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: BCAL1_ARATH (Branched-chain-amino-acid aminotransferase-like protein 1 OS=Arabidopsis thaliana GN=At3g05190 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.044e-62
Identity = 120/163 (73.62%), Postives = 131/163 (80.37%), Query Frame = -1
Query:  319 GVNLVTATTRRNSPNNLDSKXXXXXXXXXXLAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGVPIPSY 807
            G+ LVTATTRRNSPNNLDSK          LAKIE NN NA DAIMLDKDGYVSETNATNIF+VKKG VLTPHADYCLPGITRAT             ERRISLSEFHTA+EVWTTGTMGE++PVVKIDGR++GDGKVGPVT+ +Q  YKK TE+SGVPIP+Y
Sbjct:  390 GIVLVTATTRRNSPNNLDSKIHHNNLLNNILAKIESNNTNAADAIMLDKDGYVSETNATNIFMVKKGCVLTPHADYCLPGITRATVMELVVKENFILEERRISLSEFHTANEVWTTGTMGELSPVVKIDGRVIGDGKVGPVTRTLQNAYKKLTEDSGVPIPTY 552          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: BCAL2_ARATH (Branched-chain-amino-acid aminotransferase-like protein 2 OS=Arabidopsis thaliana GN=At5g27410 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.759e-61
Identity = 119/163 (73.01%), Postives = 131/163 (80.37%), Query Frame = -1
Query:  319 GVNLVTATTRRNSPNNLDSKXXXXXXXXXXLAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGVPIPSY 807
            G+ LVTATTRRNSPNNLDSK          LAKIE NNAN  DAIMLDKDG+VSETNATNIF+VKK RVLTPHADYCLPGITRAT             ERRISLSEFHTADEVWTTGTMGE++PVVKIDGR++G+GKVGPVT+R+Q  YKK T+ SGVPIP+Y
Sbjct:  387 GIVLVTATTRRNSPNNLDSKIHHNNLLNNILAKIESNNANVDDAIMLDKDGFVSETNATNIFMVKKDRVLTPHADYCLPGITRATVMELVVKENFILEERRISLSEFHTADEVWTTGTMGELSPVVKIDGRVIGEGKVGPVTRRLQNAYKKLTDGSGVPIPTY 549          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_ARCFU (Putative branched-chain-amino-acid aminotransferase OS=Archaeoglobus fulgidus GN=ilvE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.980e-26
Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = -1
Query:  328 GVNLVTATTRRNSPNNLDSKXXXXXXXXXXLAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGVPI 807
            G+  +T   RRNS + L             LAKIE N     +AI LD++GYVSE +  NIF+VK G + TP     L GITR               E  I L + +TADEV+ TGT  EI P+V IDGR +GDGK G +T+++ + + K TE  GVPI
Sbjct:  129 GLTAITVAVRRNSFDALPPNIKSLNYLNNILAKIEANAKGGDEAIFLDRNGYVSEGSGDNIFVVKNGAITTPPTINNLRGITREAVIEIINRLGIPFKETNIGLYDLYTADEVFVTGTAAEIAPIVVIDGRKIGDGKPGEITRKLMEEFSKLTESEGVPI 288          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_PSEAE (Branched-chain-amino-acid aminotransferase OS=Pseudomonas aeruginosa GN=ilvE PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20
Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = -1
Query:  361 EGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 705
            E  +  A +A+MLD +GYV+E +  NIF++K G + TP    CL GITR T             E+RI+  E + ADE + TGT  E+TP+ ++DGR +G G+ GPVT+++QK Y
Sbjct:  174 EAISGGADEAMMLDPEGYVAEGSGENIFIIKDGVIYTPEVTACLNGITRNTILTLAAEHGFKLVEKRITRDEVYIADEAFFTGTAAEVTPIREVDGRKIGAGRRGPVTEKLQKAY 288          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_AQUAE (Probable branched-chain-amino-acid aminotransferase OS=Aquifex aeolicus GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20
Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = -1
Query:  361 GVNLVTATTRRNSPNNLDSKXXXXXXXXXXL-AKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHA-DYCLPGITR-ATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 807
            G+    ++ RRN  N++ S+            AK E   +   +AI+L+  GYV+E +  NIF++K G+ +TP   ++ L GITR A              ER I+ SE +TADEV+ TGT  E+TPVV+ID R +G+G++GP+T+++Q+ Y
Sbjct:  139 GIRAKVSSWRRNDDNSIPSRWKVAGAYVNSALAKTEALMSGYDEAILLNSQGYVAEGSGENIFIIKNGKAITPSPNEHILEGITRNAVITLLKKELVVEVEERPIARSELYTADEVFLTGTAAEVTPVVEIDNRKIGNGEIGPITKQLQEFY 290          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_METJA (Putative branched-chain-amino-acid aminotransferase OS=Methanocaldococcus jannaschii GN=ilvE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = -1
Query:  328 GVNLVTATTRRNSPNNLDSKXXXXXXXXXXLAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPHA-DYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVYKKETEESGVPI 807
            G+  +T + RR   + L+            LAKI+ N A   +A +LD  G+V E    NIF+VK G + TP      L GITR               E  ++L + +TADE++ TGT  EI PV +IDGR++ + +VG +T+++++ +K    + G+ +
Sbjct:  125 GIRAITVSVRRLPVDVLNPAVKSLNYLNSVLAKIQANYAGVDEAFLLDDKGFVVEGTGDNIFIVKNGVLKTPPVYQSILKGITRDVVIKLAKEEGIEVVEEPLTLHDLYTADELFITGTAAEIVPVFEIDGRVINNKQVGEITKKLKEKFKDIRTKWGIKV 285          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_METTH (Putative branched-chain-amino-acid aminotransferase OS=Methanobacterium thermoautotrophicum GN=ilvE PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16
Identity = 57/162 (35.19%), Postives = 83/162 (51.23%), Query Frame = -1
Query:  340 GVNLVTATTRRNSPNNLDSKXXXXXXXXXXL-AKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLTPH-ADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQ----KVYKKETEES 807
            GV+   +T RR +PN + +             AK+E       +AIMLD  GY+SE +  NIFLV +G + TP  +   L GITR +             E  I+    + ADE + TGT  EITP+  +DG  +G G+ GPVT+ +Q    ++ + ETE+S
Sbjct:  138 GVDAGVSTWRRMAPNTMPNMAKAGGNYLNSQLAKMEAVRHGYDEAIMLDYHGYISEGSGENIFLVSEGEIYTPPVSSSLLRGITRDSVIKIARTEGVTVHEEPITREMLYIADEAFFTGTAAEITPIRSVDGIEIGAGRRGPVTKLLQDEFFRIIRAETEDS 299          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_SALTY (Branched-chain-amino-acid aminotransferase OS=Salmonella typhimurium GN=ilvE PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1
Query:  361 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 681
            + I LD +GY+SE    N+F VK G + TP      LPGITR               E+ +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+ +
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF 289          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_SALTI (Branched-chain-amino-acid aminotransferase OS=Salmonella typhi GN=ilvE PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1
Query:  361 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 681
            + I LD +GY+SE    N+F VK G + TP      LPGITR               E+ +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+ +
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF 289          
BLAST of CX043787 vs. ExPASy Swiss-Prot
Match: ILVE_ECOLI (Branched-chain-amino-acid aminotransferase OS=Escherichia coli (strain K12) GN=ilvE PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = -1
Query:  361 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXERRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKVY 681
            + I LD +GY+SE    N+F VK G + TP      LPGITR               E+ +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+ +
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAF 289          
The following BLAST results are available for this feature:
BLAST of CX043787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
BCAL1_ARATH6.044e-6273.62Branched-chain-amino-acid aminotransferase-like pr... [more]
BCAL2_ARATH1.759e-6173.01Branched-chain-amino-acid aminotransferase-like pr... [more]
ILVE_ARCFU6.980e-2641.88Putative branched-chain-amino-acid aminotransferas... [more]
ILVE_PSEAE1.506e-2042.61Branched-chain-amino-acid aminotransferase OS=Pseu... [more]
ILVE_AQUAE1.506e-2037.50Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_METJA5.923e-1732.30Putative branched-chain-amino-acid aminotransferas... [more]
ILVE_METTH5.014e-1635.19Putative branched-chain-amino-acid aminotransferas... [more]
ILVE_SALTY3.593e-1441.67Branched-chain-amino-acid aminotransferase OS=Salm... [more]
ILVE_SALTI3.593e-1441.67Branched-chain-amino-acid aminotransferase OS=Salm... [more]
ILVE_ECOLI3.593e-1441.67Branched-chain-amino-acid aminotransferase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13D08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D08-H15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043787 ID=CX043787; Name=CX043787; organism=Citrus sinensis; type=EST; length=810bp
TTTTTTTTTTTTTTTTTATCAAACTTCGAATTAGATATTAATTATTTTTA
GACATTACAGAAGAATAGAATTTGCAGGTTCTCGGTACTTATTCAACATA
GAATTGACTTGAGTTTGCAGAGTGACAGAATCATAAAAACTAAGGCAGCA
ACATGAAATTTTATTGGCGGATACTCTGGCTTATTCATTCATGAATTTGG
AAGCAATTTCAGCTCATCATTTCCAGTCTGTGCGCCGTTGTGCCCATCAA
TAATGACAATCTTTTGAAGCTCCATCACTTCAAACATTCTGTGACCATTG
AGACATTTGAATTGACTAATAGGATGGTATTGGCACTCCTGACTCTTCTG
TCTCTTTTTTGTAAACTTTTTGAATTCTTTGAGTTACAGGCCCCACTTTT
CCATCACCAACTATGCGCCCATCGATCTTCACAACCGGTGTTATTTCTCC
CATTGTTCCAGTTGTCCAAACCTCATCCGCTGTGTGAAACTCTGATAGGC
TGATTCTGCGCTCCTCTAGGACCAGGTTTTCCTTCACCACAAGTTCCATG
ACAGTTGCTCGAGTGATACCAGGAAGGCAATAATCAGCATGAGGTGTCAA
AACACGGCCTTTCTTCACCAAAAAGATATTTGTGGCATTTGTTTCAGATA
CATAACCGTCCTTGTCAAGCATGATTGCATCACCAGCATTTGCATTATTC
CCTTCTATCTTTGCAAGTATATTATTGAGGAGGTTATTGTGGTGAATCTT
TGAATCCAAGTTATTAGGAGAATTACGACGTGTGGTTGCTGTGACCAAAT
TTACACCATG
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