CX043541

Overview
NameCX043541
Unique NameCX043541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: U326_ARATH (UPF0326 protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23
Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = -3
Query:  489 GFTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCVFPAGLNETKV 746
            GF FR+S+L+G T +   + R++MEKL+ +Y G+T+HLI +NCNHF  +VC +L  KPIP W+NRLAR+G FCNC+ P  +  T V
Sbjct:   83 GFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCNCLLPESIQLTAV 168          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_XENLA (PPPDE peptidase domain-containing protein 1 OS=Xenopus laevis GN=pppde1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F+++I +G TD    ++   +E+L +EY GN +HL+ +NCNHF + +   L  K IPRWVNRLA   +F  CV
Sbjct:   66 FKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA---YFSTCV 137          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_DANRE (PPPDE peptidase domain-containing protein 1 OS=Danio rerio GN=pppde1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F+++I++G TD    +V   +E++ +EY GN +HL+ +NCNHF + +   L  + IPRWVNRLA   +F +CV
Sbjct:   66 FKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLA---YFSSCV 137          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_RAT (PPPDE peptidase domain-containing protein 1 OS=Rattus norvegicus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F++++++G TD    ++   +E+L +EY GN +HL+ +NCNHF + +   L  K IPRW+NRLA   +F +C+
Sbjct:   67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_PONAB (PPPDE peptidase domain-containing protein 1 OS=Pongo abelii GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F++++++G TD    ++   +E+L +EY GN +HL+ +NCNHF + +   L  K IPRW+NRLA   +F +C+
Sbjct:   67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_PIG (PPPDE peptidase domain-containing protein 1 OS=Sus scrofa GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F++++++G TD    ++   +E+L +EY GN +HL+ +NCNHF + +   L  K IPRW+NRLA   +F +C+
Sbjct:   67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_MOUSE (PPPDE peptidase domain-containing protein 1 OS=Mus musculus GN=Pppde1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F++++++G TD    ++   +E+L +EY GN +HL+ +NCNHF + +   L  K IPRW+NRLA   +F +C+
Sbjct:   67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_HUMAN (PPPDE peptidase domain-containing protein 1 OS=Homo sapiens GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.472e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F++++++G TD    ++   +E+L +EY GN +HL+ +NCNHF + +   L  K IPRW+NRLA   +F +C+
Sbjct:   67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138          
BLAST of CX043541 vs. ExPASy Swiss-Prot
Match: PPDE1_CHICK (PPPDE peptidase domain-containing protein 1 OS=Gallus gallus GN=PPPDE1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -3
Query:  519 FTFRKSILIGRTDLGPREVRAFMEKLAEEYFGNTFHLIPQNCNHFCNDVCFKLPRKPIPRWVNRLARLGFFCNCV 743
            F F++++++G TD    ++   +E+L +E+ GN +HL+ +NCNHF + +   L  K IPRWVNRLA   +F +C+
Sbjct:   66 FKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA---YFSSCI 137          
The following BLAST results are available for this feature:
BLAST of CX043541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
U326_ARATH1.650e-2352.33UPF0326 protein At4g17486 OS=Arabidopsis thaliana ... [more]
PPDE1_XENLA8.495e-1244.00PPPDE peptidase domain-containing protein 1 OS=Xen... [more]
PPDE1_DANRE1.109e-1142.67PPPDE peptidase domain-containing protein 1 OS=Dan... [more]
PPDE1_RAT2.472e-1140.00PPPDE peptidase domain-containing protein 1 OS=Rat... [more]
PPDE1_PONAB2.472e-1140.00PPPDE peptidase domain-containing protein 1 OS=Pon... [more]
PPDE1_PIG2.472e-1140.00PPPDE peptidase domain-containing protein 1 OS=Sus... [more]
PPDE1_MOUSE2.472e-1140.00PPPDE peptidase domain-containing protein 1 OS=Mus... [more]
PPDE1_HUMAN2.472e-1140.00PPPDE peptidase domain-containing protein 1 OS=Hom... [more]
PPDE1_CHICK4.216e-1140.00PPPDE peptidase domain-containing protein 1 OS=Gal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11G07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11G07-M13-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043541 ID=CX043541; Name=CX043541; organism=Citrus sinensis; type=EST; length=748bp
TTTTTTTTTTTTTTTTTAAAAAAAGAAAAAAAAAAGACATAATTATGCCA
TTTAAGGGGAAATAGAGCATTCTTTTTACAGGAAAACAAAAACGCTGCAA
CATTTTTCCAAGCAGCTGTTTCTACATTCATCAAAAAAATTTAGCAAGGC
AGGATCACCAAAGGGGGCTGAAACAAAAACCCCCATATTTTTTTTTTTCC
CATCTTATGTTTGAAATGGGAAAAATTCTAAATTTCTAAAAACGGGGGCA
ACCCAAAAAGCAATTAAAGCTTCAAGCTCAAGCTTGAAGGGGATGAACTA
TGCCCCAAAGTCAAAAATGTCGGAATACAACGTCTTTGTCTACTACTACT
TCTCATTGCAAAAGCAGTTGGACAAAATGATAATTGGGGACGAGGTACAA
AATCAAATGACGACAAAAACCTACCCGAAGGGCTTCCCAATTTCTTCTTT
TCCCCCTCTGGAACTCTATCGTCGGATCTAACTTGCCGAACCTTTGTTTC
GTTCAAACCCGCTGGAAAAACACAGTTGCAAAAAAAACCCAAGCGAGCGA
GACGATTAACCCATCGAGGAATTGGTTTCCTAGGGAGCTTAAAACACACA
TCATTGCAAAAATGATTACAGTTCTGGGGGATTAGATGAAACGTATTGCC
AAAATACTCCTCGGCGAGTTTTTCCATAAACGCGCGCACTTCCCTCGGCC
CGAGATCCGTTCTCCCGATCAATATCGACTTCCTAAACGTGAATCCCG
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