CX043468

Overview
NameCX043468
Unique NameCX043468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043468 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 59/162 (36.42%), Postives = 87/162 (53.70%), Query Frame = -3
Query:  300 LGTSESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTNGE-CPLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVG 746
            +  + + P+LD  G+++++ ++Y +L   +G  GG    G   G+ CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY+ S GKW++TT G+ G PG  TL +WFK++K  V  Y    CPSVCDSC  LC+ +G
Sbjct:   23 VANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184          
BLAST of CX043468 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 58/164 (35.37%), Postives = 85/164 (51.83%), Query Frame = -3
Query:  294 SESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGE--CPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVS-IYNLVHCPSVCDSCVKLCNKVGIF 737
            S   P+LD+ G K+ +   Y ++ V     GG ++   T NG   CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y+ S G++F+T GG+ G+PG +T+ +WFK+++   S  Y LV CP+VC SC   C  VGI+
Sbjct:   31 SAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194          
BLAST of CX043468 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.774e-12
Identity = 50/167 (29.94%), Postives = 83/167 (49.70%), Query Frame = -3
Query:  291 SESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGECPL---------DVVQLSSPTE----RDHYVRLLPFDNSTV----VRESTDLNLIEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVGIFY 737
            S++ P+LDV G +++S L Y+++    G  GG    G + N + P          DV    +P        H+ + + F+N  +       ++ L +   +W VG+Y+ASLG   L TGG +G   +    +WFK+ K S   YNL++CP    S  + C+KVG+ +
Sbjct:    3 SDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGI-FENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGYNLLYCPVTSSSDDQFCSKVGVVH 164          
BLAST of CX043468 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = -3
Query:  291 SESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGECPL---------DVVQLSSPTE----RDHY--------VRLLPFDNSTVVRESTDLNLIEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVGIFY 737
            S++ P+LDV G +++  L Y+++ +  G  GG    G + N + P          DV    +P        H+        +  + FD STV      L +   +W VG+Y+ASLG   L TGG +G   +    +WFK+ K S   YNL++CP   D   + C KVG+ +
Sbjct:   31 SDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDISTV-----KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGYNLLYCPFSSDD--QFCLKVGVVH 190          
The following BLAST results are available for this feature:
BLAST of CX043468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC9.495e-2336.4221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.586e-2035.37Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
SPI2_SOLTU5.774e-1229.94Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
SPI5_SOLTU2.865e-1130.41Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_11C04_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11C04-E7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043468 ID=CX043468; Name=CX043468; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTGAAAAAAGAGACATAATTTATTGCATTTTGTAT
ATGTAAATCCAATGAGGAGTTGCCATCAAGACGCATGTTTACATCATAGA
AAATAACAATTGCCTCCATGTTAAACACTCAAACCTAGCAACCTCTTGAG
CCTTCAGTCCAAAATGCCACGGAATCGATCGTCATTTTTTTCCCCATAGA
GGATCTTGAAGGATTAGGAGCTGGAAATAACACCAACCGGAGAGGCTGAT
CATCATCACGAACCAGAACCAGACGTCGAACGCCGTCCACATAAAAGATG
CCGACTTTGTTACAGAGTTTAACGCAAGAATCGCAAACAGATGGACAATG
AACAAGATTGTATATACTGACACTAACTTTCTTAAGCTTAAACCAATTTA
GCAACGTTTTAGCTCCTGGGTGGCCGACGATTCCTCCGGTTGTTAGAAAC
CATTTTCCTAATGAAGCATTATAGTTACCAACTGTCCATACTGGTTCTAT
CAAGTTGAGATCAGTGGATTCCCGGACAACTGTAGAATTGTCAAACGGTA
ATAATCTTACATAATGATCCCTTTCCGTAGGAGAACTTAGTTGGACAACG
TCCAACGGACACTCTCCATTTGTGCCTCCATGTATACTGAATCCACCACT
AGTGCCATTTTTGACTTCGAGAAGCTTATACTCGAGGTTGGATTCGACCT
TGTTGCCATAGACATCTAAGATTGGTTCAGATTCTGAGGTGCCCAACTGA
GCTTTTTGTGGCCAAGGCAAGGATAAGGAAGGAGAGTTTTGCTACTAATG
AAGTCTTCATTTTCTTT
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