CX043415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043415 vs. ExPASy Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26 Identity = 75/154 (48.70%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 106 EKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVS----DNSGQDVSARNMAAPRNWESMNLFPQQAGFA------PKNDTPNMIDSSLN-KPAPQTAQMTIFYGGQVIVFNDFPADKANEIMQLASNGSSLS 534 +K SFSQTCS LSQYLKE GSFGDLSLG++ + NG R+P TTM+LFP D+ QDV + NLFP+Q F+ PK D M ++ + KP QTA +TIFY GQVIVFNDF A+KA E++ LAS G++ S Sbjct: 19 KKPSFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQP-TTTMSLFPCEASNMDSMVQDV-----------KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS 160
BLAST of CX043415 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23 Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 109 KSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQDVSARNMAAPRNWESMNLFPQQAGFAPKNDTPNMIDSSLNK-------PAPQTAQMTIFYGGQVIVFNDFPADKANEIMQLASNGSSLSHGTAYPPMQLPAQGYNSFAASLPKSPV------ESTPPVSPGPPKIPTE 663 K SFSQTC+ LS+YLKE GSFGDLSLG++ + NG P T MNLFP + SG D SA + + +FP+Q+ F+ + + D + K P Q+A +TIFYGG+V+VF+DF A+KA E++ LA+ GS+ S + Y+ + +PV + P+ P P + E Sbjct: 15 KPSFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQP-----TMMNLFPC-EASGMDSSA----GQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAAQEPIQPNPASLACE 202
BLAST of CX043415 vs. ExPASy Swiss-Prot
Match: TI11B_ARATH (Protein TIFY 11B OS=Arabidopsis thaliana GN=TIFY11B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.112e-14 Identity = 53/149 (35.57%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 103 PEKSSFSQTCSLLSQYLKEGGSFGDLSLGISSNIEANGVPEIPRRPAATTMNLFPVSDNSGQD--VSARNMAAPRNWESMNLFPQQAGFAPKNDTPNMID-SSLNKPAPQT--AQMTIFYGGQVIVFNDFPADKANEIMQLASNGSSLS 534 PEKS+FSQ CSLLS+YLKE GSFG++++G++ + + L D GQ + + R ++ + F D ID S K AP++ +Q+TIF+GG+V+VFN+FP DKA EIM++A + ++ Sbjct: 7 PEKSNFSQRCSLLSRYLKEKGSFGNINMGLARK---------------SDLELAGKFDLKGQQNVIKKVETSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVA 140 The following BLAST results are available for this feature:
BLAST of CX043415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043415 ID=CX043415; Name=CX043415; organism=Citrus sinensis; type=EST; length=761bpback to top |