CX043410 | Citrus Genome Database

Overview


Name	CX043410
Unique Name	CX043410
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	694

Libraries


Library Name	Type
Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
CX043410_ssr485	microsatellite	CX043410_ssr485:485..496.	BLAST: Citrus ESTs to Prunus persica proteins V1
CX043410_ssr567	microsatellite	CX043410_ssr567:567..584.	BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7417	contig	Csv1_Contig7417:575..1268.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Properties


Property Name	Value
Genbank description	UCRCS07_10H07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10H07-P14-1-7.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX043410 ID=CX043410; Name=CX043410; organism=Citrus sinensis; type=EST; length=694bp
TTTTTTTAAAAAGAAAAATGAAGGTGGATGGTTCCTCCTGTGTAATTAAC
ATAGGTGAGATGCACATTCGTTAATAGTTAAATGACTAAAAACGGAGACT
TCTCCTGCACGCTTCAAATGGAAATGAATACTTAAACATGCAAAAGGATC
CAAGTAGGTCCTTAACGAACTCCTCAATCAAATCACGGCAGATATAATCT
TGTAAAGCCAATCCAATTCTCCCAACCTCCCTTCTCTCACCCCATGCGAT
ATCTCTACACACTTCGTTTAAACTATCTATCATGGCCTTGCTTCCCCACA
CGGGCGATATTACTTGTACTGCTGCCACGTTCTCGCTGCAGCTCTTTACT
GCCGTTTCACTTCTCATCTTTTCCACCAAACATATGTTGCTCACAGCAGT
GTCCTCCTCTCCTGGCTTTCTCTTTTGTTTCTGCTTCTGTTGGTGTATTG
CCGCTGCTCGTCCATTTGCGTAACGTCTGGGGTAGCTGCTGCTGCTGAGA
GTCGACGACAAAGGAGTGAAATCATCAAGCACGGACACTGGACTCGGTTG
CAGATCACCGTTGATCTTATTATTATTATTATTATCATTGTCTTCGCGAT
CAACGGTAACGGTAACGCTGCTACTCTTGACAACATCAATTATTTTCTTG
AGCTCTTTCAAGTCCTCATCGCATTTCTCCAACGCTTCAATCAA