DC900150

Overview
NameDC900150
Unique NameDC900150
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DC900150 vs. ExPASy Swiss-Prot
Match: SUC3_ARATH (Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.781e-12
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 2 
Query:   26 MIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 154
            MIVSLGAGPWD LFGGGN+PAFVLAS++A A GV+A  +LP L
Sbjct:  540 MIVSLGAGPWDQLFGGGNLPAFVLASVAAFAAGVIALQRLPTL 582
The following BLAST results are available for this feature:
BLAST of DC900150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUC3_ARATH6.781e-1274.42Sucrose transport protein SUC3 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionDC900150 VSS Citrus sinensis cDNA clone VS27V70 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900150 ID=DC900150; Name=DC900150; organism=Citrus sinensis; type=EST; length=413bp
AATCTCGCAATTGTTATTCCACAGNATGATTGTATCACTTGGTGCGGGTC
CATGGGATGCTCTATTTGGTGGAGGCAATATACCTGCATTCGTTTTGGCA
TCCTTATCTGCTCTTGCCGGTGGTGTTGTTGCAACTCTCAAGCTGCCACA
TCTTTCAAGCAATTCGTTCAGGTCATCTGGTTTTCATTTTGGCTAATGAC
CACTGAGACATTGTTTTGGTGATAAACCAATCTGTATATCATTAAACCAT
AGGAGCATTACTTGGTGATTTTCTTCCAGAGCCCATCAGCCATCCCTTAA
GGGACGACCAAGATAAGATCTTTTGGCTTAACACCCTGCGGAAATCAATG
GTTCTACCATTATAAATATGTATATTTTTACATATAAAAATTATTGAGTT
GCTTATTCAAATT
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