DC900139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_ORYSJ (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. japonica GN=CKS1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.960e-32 Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YSEKYFDDTYEYRHVVLPP+VAKLLPKN LLSE EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL Sbjct: 6 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_ORYSI (Cyclin-dependent kinases regulatory subunit 1 OS=Oryza sativa subsp. indica GN=CKS1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.960e-32 Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YSEKYFDDTYEYRHVVLPP+VAKLLPKN LLSE EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL Sbjct: 6 YSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_ARATH (Cyclin-dependent kinases regulatory subunit 1 OS=Arabidopsis thaliana GN=CKS1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.505e-31 Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YSEKYFDDT+EYRHVVLPP+VAKLLPKN LLSE EWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPL Sbjct: 6 YSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAVHRPEPHIMLFRRPL 71
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS2_ARATH (Cyclin-dependent kinases regulatory subunit 2 OS=Arabidopsis thaliana GN=CKS2 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.353e-31 Identity = 60/66 (90.91%), Postives = 65/66 (98.48%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YS+KYFDDT+EYRHVVLPP+VAKLLPKN +LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL Sbjct: 6 YSDKYFDDTFEYRHVVLPPEVAKLLPKNRILSESEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 71
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_PHYPO (Probable cyclin-dependent kinases regulatory subunit OS=Physarum polycephalum PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.116e-26 Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR 193 YSEKY+DD +EYRHV+LPPDVAK +PKN LLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR Sbjct: 8 YSEKYYDDKFEYRHVILPPDVAKEIPKNRLLSEGEWRGLGVQQSQGWVHYALHRPEPHILLFRR 71
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_MOUSE (Cyclin-dependent kinases regulatory subunit 1 OS=Mus musculus GN=Cks1b PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YS+KY D+ +EYRHV+LP D+AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRPL Sbjct: 8 YSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 73
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_HUMAN (Cyclin-dependent kinases regulatory subunit 1 OS=Homo sapiens GN=CKS1B PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YS+KY D+ +EYRHV+LP D+AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRPL Sbjct: 8 YSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 73
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_BOVIN (Cyclin-dependent kinases regulatory subunit 1 OS=Bos taurus GN=CKS1B PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.969e-24 Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPL 199 YS+KY D+ +EYRHV+LP D+AKL+PK L+SE+EWR +GVQQS+GWVHY IH PEPHI+LFRRPL Sbjct: 8 YSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 73
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_DROME (Cyclin-dependent kinases regulatory subunit OS=Drosophila melanogaster GN=Cks30A PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.184e-24 Identity = 44/65 (67.69%), Postives = 58/65 (89.23%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRP 196 YS+KY+D+ +EYRHVVLP ++ K++PK L++E EWR+IGVQQSRGW+HY IH+PEPHI+LFRRP Sbjct: 7 YSDKYYDEQFEYRHVVLPKELVKMVPKTHLMTEAEWRSIGVQQSRGWIHYMIHKPEPHILLFRRP 71
BLAST of DC900139 vs. ExPASy Swiss-Prot
Match: CKS1_PATVU (Cyclin-dependent kinases regulatory subunit OS=Patella vulgata PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.843e-24 Identity = 45/64 (70.31%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 2 YSEKYFDDTYEYRHVVLPPDVAKLLPKNCLLSETEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR 193 YS+KYFD+ +EYRHV+LP D+AK++PKN L+SE EWR+IGVQQS GW+HY H PEPHI+LFRR Sbjct: 8 YSDKYFDEDFEYRHVMLPKDIAKMVPKNHLMSEAEWRSIGVQQSHGWIHYMKHEPEPHILLFRR 71 The following BLAST results are available for this feature:
BLAST of DC900139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900139 ID=DC900139; Name=DC900139; organism=Citrus sinensis; type=EST; length=618bpback to top |