CN186002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLPT1_MOUSE (Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.851e-33 Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLFINYKLKSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD TRVNEFG +GED Sbjct: 523 MTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGED 604
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLPT1_HUMAN (Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.851e-33 Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLFINYKLKSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD TRVNEFG +GED Sbjct: 523 MTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGED 604
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLPT1_BOVIN (Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.407e-32 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = -3 Query: 482 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGE 724 M PQLFINYKLKSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD TRVNEFG +GE Sbjct: 523 MTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGE 603
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLPT1_DANRE (Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31 Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLFINYK+KSVAHLPWR +TYK LNT IDDLFAFVIKMP ++R+ RDD+VF IYLYQRWIY+VD RVNEFG +G D Sbjct: 521 MTPQLFINYKMKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPMMYRIGCLRDDVVFFIYLYQRWIYRVDPNRVNEFGTSGVD 602
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLP1L_BOVIN (Cleft lip and palate transmembrane protein 1-like protein OS=Bos taurus GN=CLPTM1L PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31 Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLF+NYK+KSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK+RVNEFG + ED Sbjct: 448 MLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEFGESYED 529
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLP1L_PONAB (Cleft lip and palate transmembrane protein 1-like protein OS=Pongo abelii GN=CLPTM1L PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = -3 Query: 449 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGEDDKVSDGTETD 724 M PQLF+NYKLKSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK RVNEFG + E +K + TD Sbjct: 448 MLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYE-EKAARAPHTD 538
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLP1L_HUMAN (Cleft lip and palate transmembrane protein 1-like protein OS=Homo sapiens GN=CLPTM1L PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30 Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = -3 Query: 449 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGEDDKVSDGTETD 724 M PQLF+NYKLKSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK RVNEFG + E +K + TD Sbjct: 448 MLPQLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKRRVNEFGESYE-EKATRAPHTD 538
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLP1L_MOUSE (Cleft lip and palate transmembrane protein 1-like protein OS=Mus musculus GN=Clptm1l PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.253e-30 Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLF+NYK+KSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK+RVNEFG + E+ Sbjct: 449 MLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEFGESYEE 530
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLP1L_CHICK (Cleft lip and palate transmembrane protein 1-like protein OS=Gallus gallus GN=CLPTM1L PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.843e-30 Identity = 57/82 (69.51%), Postives = 70/82 (85.37%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLF+NYK+KSVAHLPW+ TYK NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VDK+RVNE+G + E+ Sbjct: 448 MLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDIFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEYGESYEE 529
BLAST of CN186002 vs. ExPASy Swiss-Prot
Match: CLP1L_DANRE (Cleft lip and palate transmembrane protein 1-like protein OS=Danio rerio GN=clptm1l PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = -3 Query: 479 MCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPTLHRLSVFRDDLVFLIYLYQRWIYKVDKTRVNEFGFAGED 724 M PQLF+NYKLKSVAHLPW+ YK NT IDD+FAF+I MPT HRL+ FRDD+VFL+YLYQRW+Y VD++RVNE+G + ++ Sbjct: 448 MLPQLFVNYKLKSVAHLPWKAFMYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDRSRVNEYGVSYDE 529 The following BLAST results are available for this feature:
BLAST of CN186002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186002 ID=CN186002; Name=CN186002; organism=Citrus sinensis; type=EST; length=726bpback to top |