CN185986

Overview
NameCN185986
Unique NameCN185986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1862 contig Csv1_Contig1862:183..1018. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185986 vs. ExPASy Swiss-Prot
Match: CYBP_RAT (Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.433e-21
Identity = 62/166 (37.35%), Postives = 94/166 (56.63%), Query Frame = -1
Query:  224 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 697
            E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   59 EKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of CN185986 vs. ExPASy Swiss-Prot
Match: CYBP_MOUSE (Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.433e-21
Identity = 62/166 (37.35%), Postives = 94/166 (56.63%), Query Frame = -1
Query:  224 EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 697
            E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   59 EKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of CN185986 vs. ExPASy Swiss-Prot
Match: CYBP_BOVIN (Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.444e-21
Identity = 62/171 (36.26%), Postives = 98/171 (57.31%), Query Frame = -1
Query:  224 KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 712
            +L++ E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   55 ELTENEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220          
BLAST of CN185986 vs. ExPASy Swiss-Prot
Match: CYBP_PONAB (Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.285e-21
Identity = 60/171 (35.09%), Postives = 94/171 (54.97%), Query Frame = -1
Query:  224 KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 712
            +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K  +    D      + +++K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   53 ELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKEKPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of CN185986 vs. ExPASy Swiss-Prot
Match: CYBP_MACFA (Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.285e-21
Identity = 62/171 (36.26%), Postives = 96/171 (56.14%), Query Frame = -1
Query:  224 KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 712
            +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   53 ELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of CN185986 vs. ExPASy Swiss-Prot
Match: CYBP_HUMAN (Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.213e-20
Identity = 62/171 (36.26%), Postives = 96/171 (56.14%), Query Frame = -1
Query:  224 KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 712
            +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:   53 ELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
The following BLAST results are available for this feature:
BLAST of CN185986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CYBP_RAT1.433e-2137.35Calcyclin-binding protein OS=Rattus norvegicus GN=... [more]
CYBP_MOUSE1.433e-2137.35Calcyclin-binding protein OS=Mus musculus GN=Cacyb... [more]
CYBP_BOVIN2.444e-2136.26Calcyclin-binding protein OS=Bos taurus GN=CACYBP ... [more]
CYBP_PONAB9.285e-2135.09Calcyclin-binding protein OS=Pongo abelii GN=CACYB... [more]
CYBP_MACFA9.285e-2136.26Calcyclin-binding protein OS=Macaca fascicularis G... [more]
CYBP_HUMAN1.213e-2036.26Calcyclin-binding protein OS=Homo sapiens GN=CACYB... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002C23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185986 ID=CN185986; Name=CN185986; organism=Citrus sinensis; type=EST; length=835bp
ACCCCAGCACAAGCTGCTTCCATCTTGAACAGGAAATGACATTCCCAAAT
GGCAGATACTTGTGACCGCAAGTTCGCAACACAAAATGCATGAAAATGAC
AGTAATGGTAACTTCAGACAAAGGGAAGACCATACACAGAACATCACCAT
CTTTGGGGAGTATCCGACTACATCTTTAGTTTATTTAGGGATATCCCTTC
AGAGGATCAGCTGTTTTACCAGATCTAGCATCTGTCCAAGCTTTTGCAAT
TGTTCGCTTCATTTCGTCGTCACCTTCCTCGTACATATTCTTCATCAAAT
CCATAATTCCAGCCATAGGATCTCGTTCTTTATCCAGATTTGGCTTCAGC
TTATCCTCTTTGTACTGTAAGTCTAACCAATTTCCCTTTGAAGCTTTAAA
GAGCATGATGACAACCCTTGTGGGTTTAACCAGCACCTTGCTTTTCTCAG
GAACAATCTCCTGGTTCAACCTTGGGCTAGTAAACCGGTAATTCTTCCCT
TGGACATCATGGAATTTGACATCAAAGGACCACTGCTTGAACTCTGCTTC
CATTTTATCCTGGACTACTCCCTCTAAAGAAATATATATCTTGACTTTTT
CATTATCCTGATCCCAGCTGAATGATCCAAGCGTAATATAGTTGAGTGCT
GGAGTAGAAGAGACCTTAGCTGGTGTTGGAACTGGAGCTGGACCTTCCTC
TTTTGACAACTTCTCCAAGGTATGAATCTCAGAGTTAATAAGAGAGACGA
TACGAGGTCGTTTTGCGATGCTCCGTAGTTGTCTTAGCTCTTCAAATCCA
GCACCAAATCCTCCGCCATTTCTGCCTTCTGAGTG
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