CN185985

Overview
NameCN185985
Unique NameCN185985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6740 contig Csv1_Contig6740:79..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.740e-19
Identity = 78/259 (30.12%), Postives = 121/259 (46.72%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAA--LCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIV---NAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKG +L+H+  Y  +  VA   GM+E    +  LPMFH   +C T  + A  + G ++ +  Q +  +V+  + +   T F   P + N +    N   +D       +    + GA+ P ++L A  +K G  +   YGLSE    S V  + P         + R     G   + +E   V+D   ++ +PA    +GE+++ G  VMKGY K P   E    +GW +TGDL  +  D Y  I DR KD+II
Sbjct:  179 TTGKPKGAMLTHQNLYSNANDVAGYLGMDERDNVVCALPMFHV--FCLTVCMNAPLMSGATVLIEPQFSPASVFKLVKQQQATIFAGVPTMYNYLFQHENGKKDD----FSSIRLCISGGASMPVALLTAFEEKFGVTILEGYGLSEA---SPVTCFNPF-------DRGRKPGSIGTSILHVEN-KVVDPLGRE-LPAH--QVGELIVKGPNVMKGYYKMPMETEHALKDGWLYTGDLARRDEDGYFYIVDRKKDMII 417          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: ALKK_PSEOL (Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas oleovorans GN=alkK PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19
Identity = 75/256 (29.30%), Postives = 123/256 (48.05%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGA--VYLWTLPMFHCNGWCYTWSLAALCGTSICLR--QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDII 761
            TT +PKGV+ SHR   L S++ A+   +N  A    L  +PMFH N W   +S AA+ G  + L    +   ++   IA  GV+     PVV   ++ A + +       +  V   G+A P S++   +   G  V H +G++E     T          L P+ +  ++  QG    G+E   V D   +  +P DG++ G ++  G+ V+K Y  +   +  T ++GW+ TGD+     D ++ I DR+KDII
Sbjct:  188 TTGNPKGVLYSHRSTVLHSMTTAMPDTLNLSARDTILPVVPMFHVNAWGTPYS-AAMVGAKLVLPGPALDGASLSKLIASEGVSIALGVPVVWQGLLAAQAGNGSKS-QSLTRVVVGGSACPASMIREFNDIYGVEVIHAWGMTELSPFGTANTPLAHHVDLSPDEKLSLRKSQGRPPYGVELKIVNDEGIR--LPEDGRSKGNLMARGHWVIKDYFHSDPGS--TLSDGWFSTGDVATIDSDGFMTICDRAKDII 437          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACCN (2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=menE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.181e-18
Identity = 69/253 (27.27%), Postives = 111/253 (43.87%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPS-VLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+L++   +  ++  +L  G+ +   +L  +PMFH  G              + + +     ++ AI   GVT       +L  ++     +T    P  +     G  P P  +L A  QKG  V  TYG++ET   S +C    ++          M  + G     L    +   +  + +PA+ +  GEIV+ G  V +GY K   A  ET  +GW HTGDLG    + ++ + DR  D+II
Sbjct:  150 TTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRVLLVPKYDPDFIHQAIQTKGVTIISVVAKMLTDLLERLGNETY---PSSLRCMLLGGGPAPKPLLEACVQKGIPVYQTYGMTET--SSQICTLSADY----------MLTKVGSAGKPLFPCQLRIEKDGKVMPANVE--GEIVVKGPNVTRGYFKREDATRETIVDGWLHTGDLGYVDDEGFLYVLDRRSDLII 385          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACSU (2-succinylbenzoate--CoA ligase OS=Bacillus subtilis GN=menE PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.848e-18
Identity = 71/253 (28.06%), Postives = 107/253 (42.29%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPP-SVLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV  +    Y  ++S AL  G+ E   +L  LP+FH +G    +       T +  ++ +   V  +I ++ VT   A   +L S++   +       P  +     G  P P  +L    +KGF V  +YG++ET              +L PE         G      E     D +  +P        GEI++ G  VMK Y     ANE +F NGW  TGDLG    + ++ + DR  D+II
Sbjct:  155 TTGKPKGVQQTFGNHYFSAVSSALNLGITEQDRWLIALPLFHISGLSALFKSVIYGMTVVLHQRFSVSDVLHSINRHEVTMISAVQTMLASLLEETNR-----CPESIRCILLGGGPAPLPLLEECREKGFPVFQSYGMTETCSQIV---------TLSPEFSMEKLGSAGKPLFSCEIKIERDGQVCEPYEH-----GEIMVKGPNVMKSYFNRESANEASFQNGWLKTGDLGYLDNEGFLYVLDRRSDLII 388          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACLD (2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=menE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.720e-18
Identity = 72/253 (28.46%), Postives = 114/253 (45.06%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPP-SVLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+ +    Y  ++S AL  G+ E   +L  LP+FH +G    +       T +  ++  A+ V  +I    VT       +L+ +            P  +     G  P P S+L    +K   V  +YG++ET   S +    PE+         ++ +     F    K++   T  Q   P +    GEI + G  VMKGYLKN  AN+++F +GW+ TGD+G    D ++ + DR  D+II
Sbjct:  156 TTGRPKGVMQTFANHYFSAVSSALNLGLQEHDRWLIALPLFHISGLSALFKSVIYGMTVVLHQRFDAEEVLRSIKDQQVTIASVVQTMLSRLAAKVDR-----CPGSLRCLLLGGGPAPLSLLEECKRKRLPVVQSYGMTETC--SQIATLAPEYSI------EKLGSAGKPLFASSIKIEKNGTECQ---PGEH---GEITVKGPTVMKGYLKNEAANKDSFNDGWFKTGDIGYFDDDGFLYVLDRRSDLII 389          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.720e-18
Identity = 72/259 (27.80%), Postives = 112/259 (43.24%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPS-VLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEW------DSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+L++   +  ++  +L  G+ +   +L  +PMFH  G              + + +  A  ++ A+   GVT       +L  ++     +T    P  +     G  P P  +L    +KG  V  TYG++ET   S +C    ++       +  P  Q R++         +EK  V+       VPA   T GEIV+ G  V  GY     A  ET  NGW HTGDLG    + ++ + DR  D+II
Sbjct:  150 TTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGAETY---PSSLRCMLLGGGPAPKPILETCVEKGIPVYQTYGMTET--SSQICTLSADYMLTKVGSAGKPLFQCRLR---------IEKDGVV-------VPAF--TEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLII 385          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17
Identity = 70/253 (27.67%), Postives = 111/253 (43.87%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPS-VLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+L++   +  ++  +L  G+ +   +L  +PMFH  G              + + +  A  ++ A+   GVT       +L  ++     +T    P  +     G  P P  +L    +KG  V  TYG++ET   S +C    ++      +  +   +  +R   +EK  V+       VPA   T GEIV+ G  V  GY     A  ET  NGW HTGDLG    + ++ + DR  D+II
Sbjct:  150 TTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGAETY---PSSLRCMLLGGGPAPKPLLETCVEKGIPVYQTYGMTET--SSQICTLSADYMLTKVGSAGKPLFQCQLR---IEKDGVV-------VPAF--TEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLII 385          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.846e-17
Identity = 69/253 (27.27%), Postives = 111/253 (43.87%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPS-VLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+L++   +  ++  +L  G+ +   +L  +PMFH  G              + + +  A  ++ A+   GVT       +L  ++     +T    P  +     G  P P  +L    +KG  V  TYG++ET   S +C    ++      +  +   +  +R   +EK  V+       VPA   T GEIV+ G  V  GY     A  ET  NGW HTGD+G    + ++ + DR  D+II
Sbjct:  150 TTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGAETY---PSSLRCMLLGGGPAPKPLLETCVEKGIPVYQTYGMTET--SSQICTLSADYMLTKVGSAGKPLFQCQLR---IEKDGVV-------VPAF--TEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDIGYLDEEGFLYVLDRRSDLII 385          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.411e-17
Identity = 69/252 (27.38%), Postives = 113/252 (44.84%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+L++   +  ++  +   G+ +   +L  +PMFH  G              + + +  A  ++ A+   GVT       +L  ++    E+T  P    + +   G AP P +L A  +K   V  TYG++ET   S +C    ++  +   +  +   +  +R   +EK  V+       VP   +  GEIV+ G  V  GY     A  ET  NGW HTGDLG    + ++ + DR  D+II
Sbjct:  151 TTGKPKGVILTYGNHWASAVGSSFNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGEETYPPSLRCMLLG-GGPAPKP-LLEACVEKRIPVYQTYGMTET--SSQICTLSADYMLMKVGSAGKPLFQCQLR---IEKDGVV-------VPPFAE--GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLII 386          
BLAST of CN185985 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.113e-17
Identity = 69/253 (27.27%), Postives = 109/253 (43.08%), Query Frame = 3
Query:    9 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPS-VLHAMSQKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIII 764
            TT  PKGV+L++   +  ++  +L  G+ +   +L  +PMFH  G              + + +  A  ++ A+   GVT       +L  ++    E T    P  +     G  P P  +L     KG  V  TYG++ET   S +C    ++      +  +   +  +R   +EK  V+       VP   +  GEIV+ G  V  GY     A  ET  NGW HTGDLG    + ++ + DR  D+II
Sbjct:  151 TTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGEGTY---PSSLRCMLLGGGPAPKPLLETCVDKGIPVYQTYGMTET--SSQICTLSADYMLTKVGSAGKPLFQCQLR---IEKDGVV-------VPPFAE--GEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLII 386          
The following BLAST results are available for this feature:
BLAST of CN185985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
LCFB_BACSU5.740e-1930.12Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]
ALKK_PSEOL7.496e-1929.30Medium-chain-fatty-acid--CoA ligase OS=Pseudomonas... [more]
MENE_BACCN2.181e-1827.272-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACSU2.848e-1828.062-succinylbenzoate--CoA ligase OS=Bacillus subtili... [more]
MENE_BACLD3.720e-1828.462-succinylbenzoate--CoA ligase OS=Bacillus licheni... [more]
MENE_BACC73.720e-1827.802-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCQ1.082e-1727.672-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC11.846e-1727.272-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACCZ2.411e-1727.382-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACHK4.113e-1727.272-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002C22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185985 ID=CN185985; Name=CN185985; organism=Citrus sinensis; type=EST; length=765bp
GACGTTTTACAACAGCTAGTCCTAAGGGTGTGGTGTTGAGCCACAGAGGG
GCATATCTCATGTCTCTGAGTGTTGCTCTTATTTGGGGAATGAATGAAGG
AGCTGTATACTTGTGGACTTTACCAATGTTCCATTGCAATGGATGGTGTT
ACACTTGGTCACTGGCCGCTCTTTGTGGGACAAGCATATGCCTTCGGCAG
GTAACGGCCAAGGCAGTTTACTCAGCCATAGCCAAGTATGGTGTGACTCA
CTTCTGTGCTGCACCTGTGGTGCTCAACAGCATAGTCAATGCCCCATCAG
AGGACACTATCCTTCCCCTCCCCCATGTTGTGCATGTAAATACAGCTGGT
GCAGCTCCACCCCCTTCTGTTCTCCATGCGATGTCTCAAAAAGGCTTTCG
TGTCACTCACACTTATGGTCTCTCAGAAACCTATGGCCCTTCCACTGTTT
GTGCGTGGAAGCCTGAGTGGGATTCATTGCCACCTGAAACCCAAGCACGC
ATGAAAGCACGCCAAGGGGTCCGCTTTATTGGTTTGGAGAAATTAGATGT
CATTGACACTAGAACTCAGCAACCTGTTCCTGCTGACGGGAAAACAATTG
GAGAAATAGTGATGAGTGGTAATGTGGTGATGAAGGGTTACTTAAAGAAC
CCAAAAGCCAACGAGGAAACTTTTGCAAATGGATGGTACCATACTGGCGA
TCTTGGAGTAAAGCATCCGGATAATTATATAGAAATCAAAGACAGATCAA
AGGACATTATCATCT
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