CN185966

Overview
NameCN185966
Unique NameCN185966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2512 contig Csv1_Contig2512:1..742. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16
Identity = 48/144 (33.33%), Postives = 78/144 (54.17%), Query Frame = -2
Query:  244 GRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 675
            GRV  LNT+N P++  V   A  V L   A+ SP ++ + A  V YI +G  R Q+V  +GK V    ++ G L I+P+ Y V K A  +G A+ +  T PN + +H+AG    +++L   VL  A+ +  +  ++ +  R +E
Sbjct:  335 GRVTNLNTQNFPILSLVQMSAVKVNLYQNALLSPFWNIN-AHSVVYITQGRARVQVVNNNGKTVFNGELRRGQLLIIPQHYAVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPNDVLANAYRISREEAQRLKHNRGDE 477          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16
Identity = 47/144 (32.64%), Postives = 79/144 (54.86%), Query Frame = -2
Query:  244 GRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 675
            GRV  LN++N P++  V   A  V L   A+ SP ++ + A  + YI +G  + Q+V  +GK V    ++ G L IVP+ YVV K A  +G A+ +  T PN + +H+AG    +++L   VL  A+ +  +  ++ +  R +E
Sbjct:  335 GRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNIN-AHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDE 477          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = -2
Query:  244 EAPLDVDIKN--GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 708
            E P   D  N   GR+  LN+KN P +  V   A  V L   A+ SP ++ + A  V ++++G  R Q+V   G+ V    ++ G L I+P+ YVV K A+ +G  + S  TTPN + +++AG     ++L   VL  A+ +     +  ++ R  E
Sbjct:  333 ENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNIN-AHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTTPNSMVSYIAGKTSILRALPVDVLANAYRISRQESQNLKNNRGEE 488          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUB5_ORYSJ (Glutelin type-B 5 OS=Oryza sativa subsp. japonica GN=GLUB5 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = -2
Query:  244 EAPLDVDIKN--GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 708
            E P   D  N   GR+  LN++  P++  V   A  V L   A+ SP ++ + A  + YIV+G  R Q+V   GK V    ++ G L I+P+ YVV K A+ +G  + S  T  N + +HLAG    ++++   V+  A+ +  +  +  ++ R  E
Sbjct:  319 ENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVN-AHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEE 474          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUB4_ORYSJ (Glutelin type-B 4 OS=Oryza sativa subsp. japonica GN=GLUB4 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = -2
Query:  244 EAPLDVDIKN--GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 708
            E P   D  N   GR+  LN++  P++  V   A  V L   A+ SP ++ + A  + YIV+G  R Q+V   GK V    ++ G L I+P+ YVV K A+ +G  + S  T  N + +HLAG    ++++   V+  A+ +  +  +  ++ R  E
Sbjct:  319 ENPSHADTYNPRAGRITRLNSQKFPILNLVQLSATRVNLYQNAILSPFWNVN-AHSLVYIVQGHARVQVVSNLGKTVFNGVLRPGQLLIIPQHYVVLKKAEHEGCQYISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEE 474          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14
Identity = 42/144 (29.17%), Postives = 79/144 (54.86%), Query Frame = -2
Query:  244 GRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 675
            GR+  LN +  P++  V   A  V L   A+ SP ++ + A  V YI +G  R Q+V  +GK V +  ++ G L I+P+ +VV K A  +G ++ ++ T P+ + +H+AG    +++L   V+  A+ +  +  ++ +  R +E
Sbjct:  334 GRITYLNGQKFPILNLVQMSAVKVNLYQNALLSPFWNIN-AHSVVYITQGRARVQVVNNNGKTVFDGELRRGQLLIIPQHHVVIKKAQREGCSYIALKTNPDSMVSHMAGKNSIFRALPDDVVANAYRISREEARRLKHNRGDE 476          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = -2
Query:  244 EAPLDVDIKN--GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 708
            E P   D  N   GR+  LN+KN P +  V   A  V L   A+ SP ++ + A  V ++++G  R Q+V   G+ V    ++ G L I+P+ YVV K A+ +G  + S  T PN + + +AG     ++L   VL  A+ +     +  ++ R  E
Sbjct:  333 ENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNIN-AHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTNPNSMVSQIAGKTSILRALPVDVLANAYRISRQEAQNLKNNRGEE 488          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 44/157 (28.03%), Postives = 80/157 (50.96%), Query Frame = -2
Query:  244 EAPLDVDIKN--GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 708
            E P   D  N   GR+  +N++  P++  +   A  V L   A+ SP ++ + A  + Y+++G  R Q+V   GK V +  ++ G L I+P+ Y V K A+ +G  + +I T  N   +HLAG    +++L   V+  A+ +  +  +  ++ R  E
Sbjct:  318 ENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVN-AHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEE 473          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: GLUB2_ORYSJ (Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 44/157 (28.03%), Postives = 80/157 (50.96%), Query Frame = -2
Query:  244 EAPLDVDIKN--GGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANE 708
            E P   D  N   GR+  +N++  P++  +   A  V L   A+ SP ++ + A  + Y+++G  R Q+V   GK V +  ++ G L I+P+ Y V K A+ +G  + +I T  N   +HLAG    +++L   V+  A+ +  +  +  ++ R  E
Sbjct:  314 ENPSRADSYNPRAGRISSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVN-AHSLVYMIQGQSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEE 469          
BLAST of CN185966 vs. ExPASy Swiss-Prot
Match: LEGB_GOSHI (Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 43/154 (27.92%), Postives = 77/154 (50.00%), Query Frame = -2
Query:  235 DVDIKNGGRVVLLNTKNLPLVGEVGCGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRAQIVGPDGKRVLEITVKAGNLFIVPRFYVVSKIADPDGLAWFSIITTPNPIFTHLAGSIGTWKSLSPSVLEAAFNVPSDVEKQFRSKRANEAIF 696
            DV    GGR+  +N+ NLP++  +   A+   L   A+ +P ++ + A  + YI RG+GR QIV  +G+ + +  V+ G +  VP+ + V K A   G  W +  T  N   + +AG +   + L   VL  +F +  +   + +  R   ++F
Sbjct:  356 DVFNPRGGRITTVNSFNLPILQYLQLSAERGVLYNNAIYAPHWNMN-AHSIVYITRGNGRIQIVSENGEAIFDEQVERGQVITVPQNHAVVKKAGRRGFEWIAFKTNANAKISQIAGRVSIMRGLPVDVLANSFGISREEAMRLKHNRQEVSVF 508          
The following BLAST results are available for this feature:
BLAST of CN185966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GLUA1_ORYSJ3.308e-1633.33Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
GLUA2_ORYSJ7.369e-1632.64Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
SSG1_AVESA8.148e-1531.2112S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
GLUB5_ORYSJ1.815e-1430.57Glutelin type-B 5 OS=Oryza sativa subsp. japonica ... [more]
GLUB4_ORYSJ1.815e-1430.57Glutelin type-B 4 OS=Oryza sativa subsp. japonica ... [more]
GLUA3_ORYSJ5.281e-1429.17Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA6.897e-1430.5712S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]
GLUB1_ORYSJ2.007e-1328.03Glutelin type-B 1 OS=Oryza sativa subsp. japonica ... [more]
GLUB2_ORYSJ2.621e-1328.03Glutelin type-B 2 OS=Oryza sativa subsp. japonica ... [more]
LEGB_GOSHI7.626e-1327.92Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002C10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185966 ID=CN185966; Name=CN185966; organism=Citrus sinensis; type=EST; length=742bp
CAAAAGGCAATTCTTTAAGAGAACCATAGAACAATTCAGTTTTATATCCA
ACAGAAAAACTTAAAAAACTACAAAAGAAAACTTAAAACGGGCACCACAC
CTAACAACATCCACTACTACGAACAAGAACCCTAAACACTTCTTTGTTTT
TTCCTTTTAATTTCTCTTATTGAAACAGATAGAGAGAAAATGCAAGGGTG
CTGGCTGCTGCTTCGCTTAGTTCGGCGGTGGGAAGAAAATAGCCTCATTG
GCCCTCTTTGATCGGAACTGCTTTTCTACATCGGAAGGAACATTGAAAGC
TGCCTCCAACACTGAAGGAGATAATGACTTCCACGTTCCAATGCTGCCAG
CCAAGTGTGTGAATATAGGATTGGGAGTGGTGATGATTGAGAACCAAGCC
AAGCCATCAGGGTCAGCAATCTTAGAAACAACATAGAACCTTGGAACTAT
GAACAGATTGCCAGCCTTTACAGTTATTTCCAAGACTCTTTTGCCATCAG
GACCAACAATTTGGGCACGGCCACTGCCCCGAACAATGTAAGTCACTTGC
AGGGCTGAATCACAAGAGAAACCAGGAGAACACATGGCTTTGCCATCCAA
CCTAACAAGATCAGCGCCACATCCAACCTCACCAACAAGAGGAAGGTTCT
TAGTATTCAAAAGCACAACCCTTCCACCATTCTTAATGTCGACATCTAGT
GGAGCTTCCTCACAATTAAAGGCCATACCATCGCGGTGTTCC
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