CN185959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185959 vs. ExPASy Swiss-Prot
Match: P2R3C_RAT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Rattus norvegicus GN=Ppp2r3c PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.346e-15 Identity = 64/208 (30.77%), Postives = 100/208 (48.08%), Query Frame = 2 Query: 185 MLWGRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKRSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPS 775 M W LRR + S E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ I G E M NYE+F + E+ GPKC++FF+ F K D GR++I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+ Sbjct: 1 MDWKDVLRRRLASPNSDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRVSIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPT 203
BLAST of CN185959 vs. ExPASy Swiss-Prot
Match: P2R3C_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Mus musculus GN=Ppp2r3c PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.758e-15 Identity = 65/208 (31.25%), Postives = 100/208 (48.08%), Query Frame = 2 Query: 185 MLWGRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKRSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPS 775 M W LRR + S E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ I G E M NYE+F + E+ GPKC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+ Sbjct: 1 MDWKDVLRRRLASPNTDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPT 203
BLAST of CN185959 vs. ExPASy Swiss-Prot
Match: P2R3C_BOVIN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus GN=PPP2R3C PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.916e-15 Identity = 60/207 (28.99%), Postives = 99/207 (47.83%), Query Frame = 2 Query: 185 MLWGRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKRSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPS 775 M W LRR + + + + E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ +NYE+F + E+ GPKC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+ Sbjct: 1 MDWKEILRRRLATPSTSPHKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPT 203
BLAST of CN185959 vs. ExPASy Swiss-Prot
Match: P2R3C_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens GN=PPP2R3C PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.943e-14 Identity = 59/207 (28.50%), Postives = 98/207 (47.34%), Query Frame = 2 Query: 185 MLWGRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKRSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPS 775 M W LRR + + ++ E E K +D+F + ++ + TIP FY + P E + +++ ++ FL+++S +W L ++ +NYE+F + E+ G KC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+ Sbjct: 1 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPT 203
BLAST of CN185959 vs. ExPASy Swiss-Prot
Match: P2R3C_XENTR (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Xenopus tropicalis GN=ppp2r3c PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.252e-13 Identity = 62/203 (30.54%), Postives = 98/203 (48.28%), Query Frame = 2 Query: 185 MLWGRNLRRFIG-SGTGLGSEALMELETKRILLDIFREKQQ--KSAEAGTIPSFYKKKPEEGSI-SHRVQRLAKYRFLKKRSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPS 775 M W R+L+ + G SE M+ E + + + E + K + A IP FY + P E + +++ ++ FL+++S +W L ++ G E M NY +F + E+ G KC+ FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+ Sbjct: 1 MDWKRSLKEKLRRDGYVRKSEQEMKEEEMSLFTNYYTEWKGGGKVSSAQNIPRFYYRLPAEDEVLQQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QSPPLIGEEAMINYTNFQTVG----EKAGEKCKTFFTSKVFSKLIPNDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPT 198
BLAST of CN185959 vs. ExPASy Swiss-Prot
Match: P2R3C_DANRE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Danio rerio GN=ppp2r3c PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.066e-12 Identity = 51/153 (33.33%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 326 IPSFYKKKPEEGSI-SHRVQRLAKYRFLKKRSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPS 775 IP FY + P E + +++ ++ FL+++S +W L ++ V TG E M +YE F + E+ G KC+ FF+ + K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+ Sbjct: 59 IPRFYYRLPAEDEVLMQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQV-PPTTGDEAMISYESFLKVG----EKAGTKCKLFFTARVYAKLLHNDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPT 206 The following BLAST results are available for this feature:
BLAST of CN185959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185959 ID=CN185959; Name=CN185959; organism=Citrus sinensis; type=EST; length=776bpback to top |