CN185879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 8.339e-76 Identity = 142/202 (70.30%), Postives = 158/202 (78.22%), Query Frame = -3 Query: 216 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQ--------------------------PERTTGVAFRGRSYRLSD 743 FSINFGIRLLMIARYGV LEKGPFERRTADFLWMMIFG+ +LLVLS IP F + FLG+SLVFML+Y+WSREFPN+ I++YGLVTLKAFYLPWAMLALDVIFGSP++PD LGIIAGHLYYFLTVLHPLATGKN LKTPKWV K+VARWRIGAP + Q P ++ AFRGRSYRL+D Sbjct: 65 FSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLLVLSVIPFFWTPFLGVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGHLYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGGGAYSSARAPPESSNTAFRGRSYRLTD 266
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 4.900e-68 Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = -3 Query: 219 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQP--ERTTGVAFRGRSYRLS 743 FSINFGIRLLMIARYGV LEKG FE+RTADFLWMMIFGA+SLL LSAIP YFLG+ +V ML+YVWSRE+PNSQI++YGLV L++FYLPWAML LDVIFGS ++P LGI+ GH YYFL+VLHPLATGKN LKTP WV K+VAR+RIG A +P T AFRGRSYRLS Sbjct: 65 FSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAISLLALSAIPFLDIYFLGVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGHTYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRLS 241
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DER12_MAIZE (Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.176e-67 Identity = 130/179 (72.63%), Postives = 145/179 (81.01%), Query Frame = -3 Query: 219 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIG----APAINRAQPERTTGVAFRGRSYRLS 743 FSINFGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP +Y LG+ +V MLVYVWSRE PN+QINIYG++ LKAFYLPW ML LDVIFGSPL+P LGI+ GHLYY+ VLHPLATGKN LKTPKWV K+VAR+RIG AP A TG AFRGRSYRL+ Sbjct: 65 FSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSVIPQLNTYVLGLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGHLYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTG-AFRGRSYRLN 242
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DER11_MAIZE (Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 9.241e-67 Identity = 128/179 (71.51%), Postives = 148/179 (82.68%), Query Frame = -3 Query: 219 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQPERT----TGVAFRGRSYRLS 743 FS+ FGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP+F S+FLGI +V ML+YVWSRE PN+QINIYGLV L++FYLPWAML LDVIFGS L+P LGI+ GHLYYF VLHPLATGK+ LKTPKWV K+VAR+RIG A + +P +GV FRGRSYRL+ Sbjct: 65 FSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSIIPLFNSFFLGIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGHLYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGV-FRGRSYRLN 242
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.640e-26 Identity = 59/147 (40.14%), Postives = 87/147 (59.18%), Query Frame = -3 Query: 312 INFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLV 737 +NF + + R+ LE+ F R+AD+L+M IFG+ LL++ A + + FL S+ FM++YVWSR PN I+ GL T A YLPW +L + +F L D LG +AGH YYFL +PL + + LLKTP +++ L+ Sbjct: 68 MNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLLLIMDAFLFYTKIVTKVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNLM 214
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.763e-25 Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = -3 Query: 309 INFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 737 ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS D LG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 68 LDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DER22_MAIZE (Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.763e-25 Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = -3 Query: 309 INFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 737 ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS D LG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 68 LDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.763e-25 Identity = 64/152 (42.11%), Postives = 88/152 (57.89%), Query Frame = -3 Query: 309 INFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 737 ++F + +ARY LE+ F RTADF +M++FGA L L+ IP R FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS D LG+IAGH+YYFL ++P TG+ LKTP +++ L A Sbjct: 68 LDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTSIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.303e-25 Identity = 59/142 (41.55%), Postives = 89/142 (62.68%), Query Frame = -3 Query: 324 TFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHPLAT-GKNLLKTPKWV 746 +F +F ++ RY + LE+G F R ADF++M +FGA+ L++LS I + + FLG + MLVY+WSR P Q+N +G++T A YLPW +L ++ G+ V D +GI GH+Y+FL + P GK LKTP+W+ Sbjct: 64 SFGFSFLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAV-LMILSGIFV-QILFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDVFPFQEHGKRFLKTPQWL 203
BLAST of CN185879 vs. ExPASy Swiss-Prot
Match: DERL3_HUMAN (Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 58/142 (40.85%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 312 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDPLGIIAGHLYYFLTVLHP-LATGKNLLKTPKWVQKLV 734 +F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L+ MLVYVWSR P ++N +GL+T +A +LPWA++ ++ G+ ++ D LGI GH+YYFL + P GK LL+TP +++ L+ Sbjct: 70 SFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL--FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYFLEDVFPNQPGGKRLLQTPGFLKLLL 209 The following BLAST results are available for this feature:
BLAST of CN185879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185879 ID=CN185879; Name=CN185879; organism=Citrus sinensis; type=EST; length=748bpback to top |