CN185745

Overview
NameCN185745
Unique NameCN185745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6751 contig Csv1_Contig6751:507..1135. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.333e-72
Identity = 128/145 (88.28%), Postives = 138/145 (95.17%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANPDAI+VDIDGDGSFIMNVQELATI+VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y
Sbjct:  508 ANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 652          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 5.333e-72
Identity = 128/145 (88.28%), Postives = 138/145 (95.17%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANPDAI+VDIDGDGSFIMNVQELATI+VE LP+KILLLNNQHLGMVMQWEDRFYKANRAHTYLGDP+RE+EIFPNML+FA ACGIP A+VT+K +LR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG FKDVITEGDGRT+Y
Sbjct:  511 ANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPARENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFKDVITEGDGRTKY 655          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.240e-70
Identity = 125/145 (86.21%), Postives = 135/145 (93.10%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANPDAI+VDIDGDGSFIMNVQELATI+VE LP+K+LLLNNQHLGMVMQWEDRFYKANRAHT+LGDP++E EIFPNML FA ACGIP A+VT+KADLR AIQTMLDTPGPYLLDVI PHQEHVLPMIPSGG F DVITEGDGR +Y
Sbjct:  526 ANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEHVLPMIPSGGTFNDVITEGDGRIKY 670          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.926e-70
Identity = 124/143 (86.71%), Postives = 135/143 (94.41%), Query Frame = -1
Query:  195 PDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 623
            PD ++VDIDGDGSFIMNVQELATIKVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DLRAAIQ MLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR+ Y
Sbjct:  522 PDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 664          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 2.926e-70
Identity = 124/143 (86.71%), Postives = 135/143 (94.41%), Query Frame = -1
Query:  195 PDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 623
            PD ++VDIDGDGSFIMNVQELATIKVE LP+KI+LLNNQHLGMV+QWEDRFYKANRAHTYLG+PS E+EIFPNMLKFAEACG+P A+VT + DLRAAIQ MLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGR+ Y
Sbjct:  525 PDEVVVDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPSNEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRSSY 667          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.035e-59
Identity = 102/145 (70.34%), Postives = 127/145 (87.59%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANP   +VDIDGDGSF+MN+QELA I++E LP+K+++LNNQHLGMV+QWEDRFYKANRAHTYLG+P  ESEI+P+ +  A+   IP  +VT+K+++RAAI+ ML+TPGPYLLD+IVPHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  500 ANPGVTVVDIDGDGSFLMNIQELALIRIENLPVKVMVLNNQHLGMVVQWEDRFYKANRAHTYLGNPECESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 644          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.964e-59
Identity = 103/145 (71.03%), Postives = 125/145 (86.21%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANP   +VDIDGDGSF+MNVQELA I++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHTYLG+P  ESEI+P+ +  A+   IP  +VT+K ++RAAI+ ML+TPGPYLLD+IVPHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  494 ANPGVTVVDIDGDGSFLMNVQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTYLGNPENESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.763e-58
Identity = 99/145 (68.28%), Postives = 124/145 (85.52%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANP   +VDIDGDGSF+MN+QELA I++E LP+K+ +LNNQHLGMV+QWEDRFYKANRAHT+LG+P  ESEI+P+ +  A+   IP  +VT+K+++ AAI+ ML+ PGPYLLD+IVPHQEHVLPMIPSGGAFKD+I +GDGRT Y
Sbjct:  494 ANPGVTVVDIDGDGSFLMNIQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTFLGNPENESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKMLEAPGPYLLDIIVPHQEHVLPMIPSGGAFKDMILDGDGRTVY 638          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.175e-57
Identity = 99/136 (72.79%), Postives = 120/136 (88.24%), Query Frame = -1
Query:  222 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRESEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVI 629
            ANP A++VDIDGDGSFIMN+QELATI+VE LP+K+LL+NNQHLGMV+QWED FY ANRA ++LGDP+    +FP+ML FA +CGIP A+VTR+ DLR AIQTMLDTPGP+LLDV+ PHQ+HVLP+IPSGG FKD+I
Sbjct:  501 ANPGAVVVDIDGDGSFIMNIQELATIRVENLPVKVLLINNQHLGMVLQWEDHFYAANRADSFLGDPANPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTMLDTPGPFLLDVVCPHQDHVLPLIPSGGTFKDII 636          
BLAST of CN185745 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 4.535e-55
Identity = 96/147 (65.31%), Postives = 122/147 (82.99%), Query Frame = -1
Query:  195 ANPDAIIVDIDGDGSFIMNVQELATIKVEKLPIKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPSRE--SEIFPNMLKFAEACGIPGAQVTRKADLRAAIQTMLDTPGPYLLDVIVPHQEHVLPMIPSGGAFKDVITEGDGRTQY 629
            ANP A +VDIDGDGS +MN+QELA ++VE LP+K+++LNNQHLGMV+QWEDRFY ANRAHTYLG+P+     E++P+ +  A   GIP A+VTRK ++RAA++ M+  PGPYLLDV+VPHQEHVLPMIPS GAFKD+I +GDGR+ Y
Sbjct:  517 ANPGATVVDIDGDGSLLMNIQELAMVRVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPAANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPMIPSNGAFKDIIVDGDGRSSY 663          
The following BLAST results are available for this feature:
BLAST of CN185745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ILVB3_BRANA5.333e-7288.28Acetolactate synthase 3, chloroplastic OS=Brassica... [more]
ILVB1_BRANA5.333e-7288.28Acetolactate synthase 1, chloroplastic OS=Brassica... [more]
ILVB_ARATH2.240e-7086.21Acetolactate synthase, chloroplastic OS=Arabidopsi... [more]
ILVB2_TOBAC2.926e-7086.71Acetolactate synthase 2, chloroplastic OS=Nicotian... [more]
ILVB1_TOBAC2.926e-7086.71Acetolactate synthase 1, chloroplastic OS=Nicotian... [more]
ILVB1_ORYSJ3.035e-5970.34Acetolactate synthase 1, chloroplastic OS=Oryza sa... [more]
ILVB1_MAIZE3.964e-5971.03Acetolactate synthase 1, chloroplastic OS=Zea mays... [more]
ILVB2_MAIZE9.763e-5868.28Acetolactate synthase 2, chloroplastic OS=Zea mays... [more]
ILVB2_BRANA2.175e-5772.79Acetolactate synthase 2, chloroplastic OS=Brassica... [more]
ILVB2_ORYSJ4.535e-5565.31Probable acetolactate synthase 2, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001M23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185745 ID=CN185745; Name=CN185745; organism=Citrus sinensis; type=EST; length=629bp
TTTTCAATACACAAACAAATTATAATAACATTGTAACTCATAGAGTTTGT
TTGTTAAACAAACACTAGTTCCATTAAAACTGACACCTGAACTAAAAACA
CTGCCACACACTCATAGGTAAGTTAAGCCTGCAACTCAAAAGGAACATAA
ATACATAGCCAAGAAGGCATCTATGCTGCTTCAGCTTGTCGTTAATACTG
CGTTCTTCCATCACCTTCAGTGATCACATCTTTAAAAGCTCCACCACTGG
GGATCATAGGCAGGACATGCTCTTGATGAGGAACGATGACGTCCAGAAGG
TATGGTCCAGGAGTGTCCAACATAGTCTGAATTGCGGCTCTCAGATCTGC
CTTCCTTGTTACTTGTGCTCCAGGTATTCCACAGGCTTCTGCAAACTTCA
ACATATTCGGAAATATTTCAGACTCTCTTGATGGATCTCCCAAATACGTG
TGAGCCCTATTTGCCTTGTAAAACCGATCCTCCCATTGCATCACCATGCC
CAAGTGCTGATTATTCAACAGCAATATCTTGATGGGGAGTTTCTCTACCT
TAATAGTCGCCAACTCCTGGACGTTCATGATGAAACTCCCATCACCATCA
ATATCTACAATGATGGCATCAGGATTTGC
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