DC887992

Overview
NameDC887992
Unique NameDC887992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887992 vs. ExPASy Swiss-Prot
Match: KPRS4_ARATH (Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsis thaliana GN=PRS4 PE=2 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 6.829e-65
Identity = 121/139 (87.05%), Postives = 125/139 (89.93%), Query Frame = -3
Query:  154 FRDDGAWKRFHKMLDHFLTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 570
            F DDGAWKRFHK+LDH+ TVVC KVREGDKRIVR+KEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGA KVSAYVTHGVFPK SWERFT K    +E AFA FWITDSCP TVKAI NKAPFEVLSLAGSIADALQI
Sbjct:  200 FPDDGAWKRFHKLLDHYPTVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAVKVSAYVTHGVFPKSSWERFTHKK-NGLEEAFAYFWITDSCPQTVKAIGNKAPFEVLSLAGSIADALQI 337          
BLAST of DC887992 vs. ExPASy Swiss-Prot
Match: KPRS4_SPIOL (Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.172e-62
Identity = 118/139 (84.89%), Postives = 124/139 (89.21%), Query Frame = -3
Query:  154 FRDDGAWKRFHKMLDHFLTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 570
            F DDGAWKRFHK LDHF  VVCAKVREGDKRIVR+KEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGA KVSAYVTH VFPK S+ERFT K+ +  + AF  FWITDSCP TVK+IANKAPFEVLSLAGSIADALQI
Sbjct:  181 FPDDGAWKRFHKQLDHFPMVVCAKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGATKVSAYVTHAVFPKNSFERFTHKD-DGSDKAFTYFWITDSCPRTVKSIANKAPFEVLSLAGSIADALQI 318          
BLAST of DC887992 vs. ExPASy Swiss-Prot
Match: KPRS4_ORYSJ (Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g0714600 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 8.940e-57
Identity = 112/139 (80.58%), Postives = 117/139 (84.17%), Query Frame = -3
Query:  154 FRDDGAWKRFHKMLDHFLTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 570
            F DDGAWKRFHK+L +F  VVCAKVREGDKRIVRIKEGNP G HVVIVDDLVQSGGTL ECQKVLAAHGAAKVSAYVTH VFPK S+ERFT  N     + FA FWITDSCP TVKAI  + PFEVLSLAGSIADALQI
Sbjct:  187 FPDDGAWKRFHKLLLNFPMVVCAKVREGDKRIVRIKEGNPEGRHVVIVDDLVQSGGTLRECQKVLAAHGAAKVSAYVTHAVFPKQSYERFTHTNSAGSADKFAYFWITDSCPQTVKAINQQPPFEVLSLAGSIADALQI 325          
BLAST of DC887992 vs. ExPASy Swiss-Prot
Match: KPRS3_SPIOL (Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.437e-56
Identity = 105/139 (75.54%), Postives = 114/139 (82.01%), Query Frame = -3
Query:  154 FRDDGAWKRFHKMLDHFLTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 570
            F DDGAWKRFHK L HF  +VCAKVREGD+RIVR+KEG+P G HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG+FP  SWERF        E    +FWITDSCPLTVK + N+ PFEV+SLAGSIA ALQI
Sbjct:  268 FPDDGAWKRFHKQLQHFPMIVCAKVREGDQRIVRLKEGDPTGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGIFPNKSWERFKPDTAGCPEEGMTHFWITDSCPLTVKMVKNRPPFEVISLAGSIAAALQI 406          
BLAST of DC887992 vs. ExPASy Swiss-Prot
Match: KPRS3_ORYSJ (Ribose-phosphate pyrophosphokinase 3 OS=Oryza sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.093e-54
Identity = 102/139 (73.38%), Postives = 115/139 (82.73%), Query Frame = -3
Query:  154 FRDDGAWKRFHKMLDHFLTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 570
            F DDGAWKRF+K L HF  VVC KVREG++RIVRIKEG+P G HVVIVDDLVQSGGTLIECQKVLA HGAAKVSAYVTHG+FP  SWE+F   NGE   +  ++FWITDSCPLTV A+ ++ PFE+LSLAG IA ALQI
Sbjct:  271 FPDDGAWKRFYKQLQHFPMVVCNKVREGEQRIVRIKEGDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKVSAYVTHGIFPNKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQPFEILSLAGPIASALQI 409          
BLAST of DC887992 vs. ExPASy Swiss-Prot
Match: KPRS3_ARATH (Ribose-phosphate pyrophosphokinase 3 OS=Arabidopsis thaliana GN=PRS3 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.424e-54
Identity = 101/139 (72.66%), Postives = 113/139 (81.29%), Query Frame = -3
Query:  154 FRDDGAWKRFHKMLDHFLTVVCAKVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 570
            F DDGAWKRFHK L H+ T+VC KVR GDKRIVRIKEG+  G HVVIVDDLVQSGGTLIECQKVLAAHGAAK+SAYVTHG+FP+ SW+RF L    +     + FWITDSC +TVK + NK PFEVLSLAGSIA ALQ+
Sbjct:  273 FPDDGAWKRFHKQLQHYPTIVCNKVRMGDKRIVRIKEGDAEGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPRSSWKRFKLDTKGDPAEGLSYFWITDSCGMTVKEVMNKPPFEVLSLAGSIASALQV 411          
The following BLAST results are available for this feature:
BLAST of DC887992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
KPRS4_ARATH6.829e-6587.05Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsi... [more]
KPRS4_SPIOL3.172e-6284.89Ribose-phosphate pyrophosphokinase 4 OS=Spinacia o... [more]
KPRS4_ORYSJ8.940e-5780.58Ribose-phosphate pyrophosphokinase 4 OS=Oryza sati... [more]
KPRS3_SPIOL4.437e-5675.54Ribose-phosphate pyrophosphokinase 3, mitochondria... [more]
KPRS3_ORYSJ1.093e-5473.38Ribose-phosphate pyrophosphokinase 3 OS=Oryza sati... [more]
KPRS3_ARATH5.424e-5472.66Ribose-phosphate pyrophosphokinase 3 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionDC887992 EIC Citrus sinensis cDNA clone EIC1223 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887992 ID=DC887992; Name=DC887992; organism=Citrus sinensis; type=EST; length=575bp
TTGTATTTTAATTTTTATTTATTTGTTTATTTTTTCCCCCCACAAAAGTT
GGGATTTCACACAAGTCTTGTGATACATATCATATCAATAATAAACCTAG
CATATAAGAAAATTGCAGTGCTTATGAAGTTACATTGCCAACAAAATCCA
TCAGATTTGTAGAGCATCAGCAATCGATCCTGCCAGGCTCAAAACTTCAA
AAGGAGCCTTATTTGCTATGGCCTTGACAGTGAGCGGGCACGAATCCGTG
ATCCAAAAGTTGGCAAAAGCATTCTCCATGTTTTCGCCGTTCTTGAGAGT
GAATCGCTCCCAAGAGCCTTTTGGAAACACACCATGCGTGACATAAGCGC
TCACCTTCGCTGCACCATGAGCTGCTAGAACTTTCTGGCACTCAATGAGA
GTGCCTCCGGATTGCACCAAATCATCAACAATGACCACATGACAACCAGC
AGGATTTCCCTCCTTGATCCTAACTATCCTCTTATCACCTTCACGAACCT
TGGCACACACCACCGTAAGGAAATGATCCAGCATCTTGTGGAACCGCTTC
CAGGCTCCATCATCCCGGAAATGCA
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