DC887926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 8.760e-51 Identity = 99/120 (82.50%), Postives = 108/120 (90.00%), Query Frame = -3 Query: 265 HSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCS 624 HSTFENVE WL+ELR+HTDPNIVVML+GNKSDLRHLVAV TED KSFAEKESL+FMETSALEATNV+NAFAEVLTQI+ IVSKKAME + N VPSKG+KID+ KDVSAVKKGGCCS Sbjct: 98 HSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESAN--VPSKGDKIDIGKDVSAVKKGGCCS 215
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.494e-50 Identity = 95/120 (79.17%), Postives = 111/120 (92.50%), Query Frame = -3 Query: 265 HSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCS 624 HSTFENVERWL+ELRDHTDPNIVVML+GNKSDLRHLVAV T++GK+FAE+ESL+FMETSALE+TNV+NAFAEVLTQIYRIVSK+++E G+D G+ P KGEKI++ DVSAVKKGGCCS Sbjct: 99 HSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSG--PGKGEKINIKDDVSAVKKGGCCS 216
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.386e-48 Identity = 92/120 (76.67%), Postives = 107/120 (89.17%), Query Frame = -3 Query: 262 STFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCST 621 +TFEN RWL+ELRDHTDPNIVVMLIGNKSDLRHLVAV TEDGKSFAE+ESL+FMETSALEATNV+NAF EVLTQIYRIVSK+A+E G+ G +S +PSKG+ I+V +D S +K+ GCCST Sbjct: 99 ATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.916e-46 Identity = 93/119 (78.15%), Postives = 109/119 (91.60%), Query Frame = -3 Query: 265 STFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCS 621 +TFENV+RWL+EL++HTDPNIVVML+GNKSDLRHL+AV TEDGKS+AE+ESL FMETSALEATNV++AFAEVLTQIYRI SKK +E GED GN++VP KGEKI+V DVSA+KK GCCS Sbjct: 99 ATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED-GNASVP-KGEKIEVKNDVSALKKLGCCS 215
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.183e-45 Identity = 86/121 (71.07%), Postives = 102/121 (84.30%), Query Frame = -3 Query: 262 HSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCST 624 H T+ENV RWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVST++ K AE+E L+FMETSALEATNV+NAF E LTQIYRIVSKKA+E G++G S+ P KGE I++ + S+ KK GCCS+ Sbjct: 98 HVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.090e-44 Identity = 87/119 (73.11%), Postives = 103/119 (86.55%), Query Frame = -3 Query: 265 STFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCS 621 +TFE RWL+ELRDHTDPNIVVMLIGNKSDLRHLV VSTEDGK+FAEKESL+FMETSALEATNV+NAF+EVLTQIYRIVSK+A+E G+ S VPS+G+ I+V++D S + + CCS Sbjct: 99 TTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCS 217
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.824e-41 Identity = 85/122 (69.67%), Postives = 105/122 (86.07%), Query Frame = -3 Query: 262 HSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSK-DVSAVKKGGCCST 624 H TFENVERWL+ELRDHTD NIV+ML+GNK+DLRHL AVSTED K+FAE+E+ FFMETSALE+ NV+NAF EVLT+IY++V +KA+E G+D +A+P KG+ I+V K DVSAVKK GCCS+ Sbjct: 99 HVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDD--PAALP-KGQTINVGKDDVSAVKKVGCCSS 217
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.824e-41 Identity = 82/120 (68.33%), Postives = 102/120 (85.00%), Query Frame = -3 Query: 265 HSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCS 624 H+TFEN RWLRELR HTDPNIVVMLIGNK DLRHLVAV TE+ K+FAE+ESL+FMETSAL+ATNV+NAF EVLTQI++IVSK++++ G G ++ +P KGE I+V +D S +K+ GCCS Sbjct: 98 HATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCS 215
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.730e-34 Identity = 71/119 (59.66%), Postives = 89/119 (74.79%), Query Frame = -3 Query: 262 TFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCST 618 TF+NV+RWLRELRDH D NIV+M+ GNKSDL HL AVS +DG + +EKE L F+ETSALEATN++ AF +LT+IY IVSKKA+ E ++VP +G I+V+ D S K GCCST Sbjct: 99 TFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVA-DTSGNTKKGCCST 216
BLAST of DC887926 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33 Identity = 70/119 (58.82%), Postives = 90/119 (75.63%), Query Frame = -3 Query: 262 TFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCCST 618 TF+NV+RWLRELRDH D NIV+M+ GNKSDL+HL AVS EDG++ AEKE L F+ETSALEA N++ AF +LT+IY I+SKKA+ E N +P +G I+V+ D SA ++ CCST Sbjct: 99 TFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSN--LPGQGTTINVA-DASANQRRSCCST 214 The following BLAST results are available for this feature:
BLAST of DC887926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887926 ID=DC887926; Name=DC887926; organism=Citrus sinensis; type=EST; length=626bpback to top |