DC887918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887918 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.768e-23 Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = -1 Query: 12 VKPVEDRAAGKRKAVLKASKSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 275 +K + +A K +K + K+TK A KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+ VGKAGG+KWK LT AEKAP Sbjct: 1 MKGGKSKAKSDNKLAVKKQAADTKKTKK---AVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAP 85
BLAST of DC887918 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.921e-23 Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = -1 Query: 12 KDKNEVVKPVEDRAAGKRKAVLKASKSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 293 K K E + A K+ A KA K + K A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP KAVSAVGKA G KWK+++DAEKAP Sbjct: 5 KSKTESKRADPKLAVNKKGAATKARKPAGKG-----KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAP 93
BLAST of DC887918 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.093e-20 Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = -1 Query: 12 EDRAAGKRKAVLKASKSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 263 E + A + AV K ++ K K K KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ EKAP Sbjct: 9 ESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAP 94
BLAST of DC887918 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.687e-20 Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 12 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASKSSNKRTKNVKS-AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 326 MK + KGA K D VK SK + K K K A KDPNKPKR PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++++KAP Sbjct: 1 MKGAKSKGAAKADAKLAVK----------------SKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAP 90
BLAST of DC887918 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.135e-19 Identity = 52/105 (49.52%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 12 MKVTRGKGAVKKDKNEVVKPVEDRAAGKRKAVLKASKSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAP 326 MK + KGA K D VK + G K K K A KDPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL+++EKAP Sbjct: 1 MKGAKSKGAAKADAKLAVK-----SKGAEKPAAKGKKGK---------AGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAP 91 The following BLAST results are available for this feature:
BLAST of DC887918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887918 ID=DC887918; Name=DC887918; organism=Citrus sinensis; type=EST; length=401bpback to top |