CN185468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9_BOVIN (Transcription initiation factor TFIID subunit 9 OS=Bos taurus GN=TAF9 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.247e-31 Identity = 63/129 (48.84%), Postives = 92/129 (71.32%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKKQSA 463 + +P+DA+++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K T+D DD++LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L SL KK SA Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKSLQKKASA 138
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9_HUMAN (Transcription initiation factor TFIID subunit 9 OS=Homo sapiens GN=TAF9 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.527e-30 Identity = 62/128 (48.44%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKKQS 460 + +P+DA+++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K T+D DD++LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L SL KK S Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKSLQKKAS 137
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9_MOUSE (Transcription initiation factor TFIID subunit 9 OS=Mus musculus GN=Taf9 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.994e-30 Identity = 62/129 (48.06%), Postives = 91/129 (70.54%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKKQSA 463 + +P+DA+++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K T+D DD++LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L SL KK A Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKSLQKKAPA 138
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9_RAT (Transcription initiation factor TFIID subunit 9 OS=Rattus norvegicus GN=Taf9 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.441e-30 Identity = 61/126 (48.41%), Postives = 90/126 (71.43%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKK 454 + +P+DA+++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K T+D DD++LA+Q + + SF+ PP R+ LL++A+ RN+ PLP G LPP++ L +PNY+L SL KK Sbjct: 10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRLKSLQKK 135
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9B_MOUSE (Transcription initiation factor TFIID subunit 9B OS=Mus musculus GN=Taf9b PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.292e-29 Identity = 61/126 (48.41%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKK 454 ++ PRDA ++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K T+D DD++LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L SL KK Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLVKK 135
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9B_RAT (Transcription initiation factor TFIID subunit 9B OS=Rattus norvegicus GN=Taf9b PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 2.879e-29 Identity = 60/126 (47.62%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKK 454 ++ PRDA ++ +LK MG+ +YEPRVI+Q LE +RYV +L DA++YS HA K T+D DD++LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L SL KK Sbjct: 10 KNAPRDALVMAQILKDMGITDYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLVKK 135
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9B_PONAB (Transcription initiation factor TFIID subunit 9B OS=Pongo abelii GN=TAF9B PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29 Identity = 60/126 (47.62%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKK 454 ++ PRDA ++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K +D DD++LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L SL KK Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLIKK 135
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9B_HUMAN (Transcription initiation factor TFIID subunit 9B OS=Homo sapiens GN=TAF9B PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.413e-29 Identity = 60/126 (47.62%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 80 EDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL-SLPKK 454 ++ PRDA ++ +LK MG+ EYEPRVI+Q LE +RYV +L DA++YS HA K +D DD++LA+Q + + SF+ PP R+ LL++A+ +N+ PLP G LPP++ L +PNY+L SL KK Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRLKSLIKK 135
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9_DROME (Transcription initiation factor TFIID subunit 9 OS=Drosophila melanogaster GN=e(y)1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.522e-25 Identity = 57/128 (44.53%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 86 LPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL---SLPKKQS 460 +P+DA+++ S+LK + V+EYEPRV++Q LE +RYV +L DA+VY+ HA K TID DD++LA + ++ SF+ P R VL ++A RN +PLP G+ LPP++ L NY+L + PKK + Sbjct: 18 VPKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDRYCLTGVNYKLRATNQPKKMT 145
BLAST of CN185468 vs. ExPASy Swiss-Prot
Match: TAF9_ENCCU (Transcription initiation factor TFIID subunit 9 OS=Encephalitozoon cuniculi GN=TAF9 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.970e-23 Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 65 MAEGDEDLPRDAKIVKSLLKSMGVEEYEPRVIHQFLEVWYRYVVDVLTDAQVYSEHAGKTTIDCDDIKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSISAPGIPLPPEQDTLISPNYQL 439 MA G+ PRDAK++ +L+S+G+EE EP+VI Q LE YRY DVL DA ++++H G+T I D+KLA+Q+KV F PP R+ L E++ N PL I +PP L++ +Y++ Sbjct: 1 MASGENLAPRDAKVISVILRSLGIEECEPKVIIQLLEFAYRYTTDVLEDALLFAKHTGRTHITTSDVKLALQTKVGRHFVPPPPRQYLSEISTMVNSKPLTIPDGENLIRVPPSSSALLNLDYEV 125 The following BLAST results are available for this feature:
BLAST of CN185468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185468 ID=CN185468; Name=CN185468; organism=Citrus sinensis; type=EST; length=470bpback to top |