CN185457

Overview
NameCN185457
Unique NameCN185457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10607 contig Csv1_Contig10607:4..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185457 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 61/200 (30.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  133 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAH 699
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+     E D FV   +V            +GV  +V +Y G  H
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV---IDIAKKVWKNGVDVKVKVYSGVTH 199          
BLAST of CN185457 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 56/198 (28.28%), Postives = 92/198 (46.46%), Query Frame = 1
Query:  133 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAH 699
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+     E D FV   +V            +GV  +V ++ G  H
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV---IDIAKTVWKNGVDVQVKVFSGVTH 199          
BLAST of CN185457 vs. ExPASy Swiss-Prot
Match: YGHX_ECOLI (Putative uncharacterized protein yghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 51/173 (29.48%), Postives = 86/173 (49.71%), Query Frame = 1
Query:  193 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGL--DTAEAQHLMSGLDWPGAVKDIHASVNWLKA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAH 699
            P +VVV E  G++  I++ A ++++   G+ AL PD      G   +  + + L   +D    + D  A++ +++     + KVG+TG+C GG ++ A++V  PE+   V FYG   P  AD  + +AP+  HF ELD  +     +           +   YE +IYPG  H
Sbjct:   82 PAVVVVHENRGLNPYIEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAP-TADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNH 247          
The following BLAST results are available for this feature:
BLAST of CN185457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
USF_AQUPY2.997e-1630.50Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
DLHH_AQUAE8.162e-1428.28Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
YGHX_ECOLI5.849e-1229.48Putative uncharacterized protein yghX OS=Escherich... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185457 ID=CN185457; Name=CN185457; organism=Citrus sinensis; type=EST; length=700bp
ATGGCTGCTTCGAGAATCTTGAGCAGATCAACTCCGCTTCTTAAGCCCTC
TCTCGCAAGGACTCACTTTCCCGCCGGTTATCGCTTTGCAGTCAGATCAA
TGGCAGACTCTGCAGCTTCGCCCTTCAAGAAAATCCAGATTCAGAGAGAT
GATACTACTTTTGATGCATATGTGGTTGGCAAAGAAGACGCCCCTGGGAT
TGTTGTAGTTCAGGAGTGGTGGGGTGTTGATTTTGAGATCAAGAACCATG
CTGTCAAAATCTCCCAACTAAACCCTGGATTCAAGGCACTTATACCAGAT
TTATATCGGGGAAAGGTTGGTTTGGATACTGCTGAAGCACAGCACTTGAT
GAGTGGTCTTGATTGGCCAGGTGCTGTCAAGGATATCCACGCTTCAGTTA
ATTGGCTTAAGGCAAATGGTTCCAAGAAGGTTGGCGTGACTGGATATTGC
ATGGGAGGTGCTCTCGCTATTGCAAGTTCTGTCTTAGTTCCTGAGGTTGA
TGCTGTTGTTTCATTTTATGGGGTTCCCCCACCTGAGCTCGCCGATCCTA
CCCAGGCTAAGGCACCTGTTCAAGCTCATTTTGGGGAGCTTGACAATTTT
GTTGGCTTTTCAGATGTGAAAACTGCCAAAGCATTGGAGGAAAAGCTGAA
AGCATCTGGTGTTCCATATGAGGTACATATTTATCCTGGCAGTGCACATG
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