CN185450

Overview
NameCN185450
Unique NameCN185450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 1.050e-114
Identity = 201/207 (97.10%), Postives = 204/207 (98.55%), Query Frame = 3
Query:    6 DFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLEDKDMAFTASPGTKG 626
            DFD+LLSIK+AWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAR+HIKDMMRQMWKKVNAYTADKDSPLT TT EFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLEDK MAFTASPGTKG
Sbjct:  400 DFDLLLSIKNAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVARQHIKDMMRQMWKKVNAYTADKDSPLTGTTTEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLEDKHMAFTASPGTKG 606          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.129e-53
Identity = 104/191 (54.45%), Postives = 134/191 (70.16%), Query Frame = 3
Query:    9 FDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPL 581
            F ++  +K AW+ L + YLVEAKWY +KY P L+EY+EN  +SI  P I+  +Y   TNPI K+ L+ LE  P+I+ WSS I RL DDLGTS+DE++RGDVPK+IQCYM+ETGASEE ARE+IK ++   WKK+N   A   SP +    E  LNL RM+  +Y HGDGHG+ N+ET D   +LL QPIPL
Sbjct:  405 FHIIKYLKKAWVDLCRYYLVEAKWYSNKYRPSLQEYIENAWISIGAPTILVHAYFFVTNPITKEALDCLEEYPNIIRWSSIIARLADDLGTSTDELKRGDVPKAIQCYMNETGASEEGAREYIKYLISATWKKMNKDRA-ASSPFSHIFIEIALNLARMAQCLYQHGDGHGLGNRETKDRILSLLIQPIPL 594          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.119e-42
Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 3
Query:    9 FDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQP 572
            F+ +  ++ +W+ L++ YL EA WY++ Y P LEEYL N  +SI+ P II+  Y +  N I +  +E L    +I++ S  I RL DDLGTS  E++RGDVPK+IQCYM++T ASE  A EH+K ++R+ WK++N  T   D P T        NL R + F+YL GDGHGVQ+ E       LLFQP
Sbjct:  401 FNSIPYLQRSWVSLVEGYLKEAYWYYNGYKPSLEEYLNNAKISISAPTIISQLYFTLANSIDETAIESLYQYHNILYLSGTILRLADDLGTSQHELERGDVPKAIQCYMNDTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDDLVAAAANLARAAQFIYLDGDGHGVQHSEIHQQMGGLLFQP 588          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.640e-41
Identity = 86/185 (46.49%), Postives = 124/185 (67.03%), Query Frame = 3
Query:   30 KHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFL-ESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPL 581
            K   + L + +L EAKW++S Y P L+EY+ENG +S+ G +I+  +Y + TNP+ K+ LE L + +P+IV  +S I RL DDLGT SDE++RGDVPKSIQCYMH+TGASE+ AREHIK ++ + WK++N    + +S  +    +   NL R S F+Y +GDGH  QN  + +    L+  PIP+
Sbjct:  438 KKLMVELCKHHLQEAKWFYSGYKPTLQEYVENGWLSVGGQVILMHAYFAFTNPVTKEALECLKDGHPNIVRHASIILRLADDLGTLSDELKRGDVPKSIQCYMHDTGASEDEAREHIKYLISESWKEMNNEDGNINSFFSNEFVQVCQNLGRASQFIYQYGDGHASQNNLSKERVLGLIITPIPM 622          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.493e-40
Identity = 89/198 (44.95%), Postives = 124/198 (62.63%), Query Frame = 3
Query:    6 DFDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFL-ESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVN--AYTADKDSP-LTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQ-ETIDVGFTLLFQPIPLE 584
            + D++   K +W  L +AYLVEAKWY   Y P +EEY++N  +SI+ P ++   Y + +  I  + LE L +   D+V  S+ + RL +DL TS DE+ RGDV KS+QCYMHETG SEE AR H++ M+   W ++N  A TA + S  L+R   E  +NL RMS  MY HGDGHG  ++ + +D   TLL  PIPL+
Sbjct:  401 NIDVIPYFKKSWADLCKAYLVEAKWYKGGYKPSVEEYMQNAWISISAPTMLIHFYCAFSGQISVQILESLVQQQQDVVRCSATVLRLANDLATSPDELARGDVLKSVQCYMHETGVSEEEARTHVQQMISHTWDEMNYEARTAARSSSLLSRRFVETAMNLARMSQCMYQHGDGHGCPDKAKIVDRVQTLLVDPIPLD 598          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.449e-39
Identity = 90/195 (46.15%), Postives = 121/195 (62.05%), Query Frame = 3
Query:   12 DMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPD-IVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNA--YTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGV-QNQETIDVGFTLLFQPIPLE 584
            D++  +K +W  L + YLVEAKWY   Y P LEEY++N  +SI+ P I+   Y   ++ I  + LE L  +   IV  S+ + RL +DLGTS  E+ RGDV KS+QCYMHETGASEE AR+H+  M+  MW  +N+   TA   S  +R   E  +NL RMS  MY +GDGHG  +  +TID   +LL  PIPL+
Sbjct:  401 DVIPYLKKSWADLCRTYLVEAKWYKRGYKPSLEEYMQNAWISISAPTILIHFYCVFSDQISVQNLETLSQHRQHIVRCSATVLRLANDLGTSPTELARGDVLKSVQCYMHETGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCPEKAKTIDRVQSLLVDPIPLD 595          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.390e-39
Identity = 88/189 (46.56%), Postives = 121/189 (64.02%), Query Frame = 3
Query:   27 IKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFL-ESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFL---LNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPL 581
            +K++W  L + YL EAKW++S Y P L++Y+EN  +SI G +I   ++ S T  I  + LE L E +       S + RL DDLGT SDE++RGDVPKSIQCYMH+TGASE+ AREHIK ++ ++WK++N    D+D   +  + EF+    NL RMS FMY HGDGH  Q+  +      L+  PIPL
Sbjct:  431 LKNSWAELCRCYLEEAKWFYSGYKPTLKKYIENASLSIGGQIIFVYAFFSLTKSITNEALESLQEGHHAACRQGSLMLRLADDLGTLSDEMKRGDVPKSIQCYMHDTGASEDEAREHIKFLISEIWKEMN----DEDEYNSIFSKEFVQACKNLGRMSLFMYQHGDGHASQDSHSRKRISDLIINPIPL 615          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.086e-38
Identity = 85/189 (44.97%), Postives = 119/189 (62.96%), Query Frame = 3
Query:   27 IKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNP-DIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVN-AYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHG-VQNQETIDVGFTLLFQPIPLE 584
            +K +W  + +AYLVEAKWY S + P LEEY++N  +SI+ P I    Y   ++ +  + LE L  +  ++V  SS +FRL +DL TS DE+ RGDV KSIQCYM ETGASE+ AR H++ M+  +W ++N    A   S L     E ++NL RMS  MY +GDGHG  +  + +D   +LLF PIPL+
Sbjct:  403 LKKSWTDVSKAYLVEAKWYKSGHKPNLEEYMQNARISISSPTIFVHFYCVFSDQLSIQVLETLSQHQQNVVRCSSSVFRLANDLVTSPDELARGDVCKSIQCYMSETGASEDKARSHVRQMINDLWDEMNYEKMAHSSSILHHDFMETVINLARMSQCMYQYGDGHGSPEKAKIVDRVMSLLFNPIPLD 591          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.833e-34
Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = 3
Query:    9 FDMLLSIKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKE-LEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQP 572
            F  L  ++ + + L++AY  EAKWYHS YTP L+EYL    +S+  P II+ +Y +  N       ++ L    DI+  +  I RL DDLGTS  E+ RGDVPK+IQCYM ET ASEE A EH+K ++R+ WK +N   A    P          N+ R++ F+YLHGDG GVQ+ +T +    LLF+P
Sbjct:  409 FFCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIA-AGYPFPDGMVAGAANIGRVAQFIYLHGDGFGVQHSKTYEHIAGLLFEP 596          
BLAST of CN185450 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.126e-34
Identity = 72/169 (42.60%), Postives = 110/169 (65.09%), Query Frame = 3
Query:   27 IKHAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLH-GDGHGVQN 530
            ++ AW+ L+++YL+EAKWY+  + P LEEY++N  +SI G  I++  +   T+ I +++ E +    DIV  S  I RL DD+GTS DE++RGDVPKS+QCYM+E  ASEE AREH++ ++ Q WK +N       S  ++   +   NL RM+ ++Y H  DG G+Q+
Sbjct:  409 LRKAWVDLVESYLIEAKWYYMGHKPSLEEYMKNSWISIGGIPILSHLFFRLTDSIEEEDAESMHKYHDIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEM--MTSSFSKYFVQVSANLARMAQWIYQHESDGFGMQH 575          
The following BLAST results are available for this feature:
BLAST of CN185450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RLC1_CITLI1.050e-11497.10(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL5.129e-5354.45Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
SSS_SALOF3.119e-4245.21(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]
TPS1_CANSA2.640e-4146.49(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
MYRS2_ARATH8.493e-4044.95Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
CINS_ARATH1.449e-3946.151,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
TPS2_CANSA9.390e-3946.56(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
MYRS1_ARATH6.086e-3844.97Myrcene/ocimene synthase 1, chloroplastic OS=Arabi... [more]
BPPS_SALOF1.833e-3443.39(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
SCS_SALOF3.126e-3442.601,8-cineole synthase, chloroplastic OS=Salvia offi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185450 ID=CN185450; Name=CN185450; organism=Citrus sinensis; type=EST; length=812bp
GAGGGGATTTTGATATGCTTCTGAGCATAAAACATGCATGGCTTGGCTTA
ATACAAGCCTACTTGGTGGAGGCGAAATGGTACCATAGCAAGTACACACC
GAAACTGGAAGAATACTTGGAAAATGGATTGGTATCAATAACGGGCCCTT
TAATTATAACGATTTCATATCTTTCTGGTACAAATCCAATCATTAAGAAG
GAACTGGAATTTCTAGAAAGTAATCCAGATATAGTTCACTGGTCATCCAA
GATTTTCCGTCTGCAAGATGATTTGGGAACTTCATCGGACGAGATACAGA
GAGGGGATGTTCCGAAATCAATCCAGTGTTACATGCATGAAACTGGTGCC
TCGGAGGAAGTTGCTCGTGAACACATCAAGGATATGATGAGACAGATGTG
GAAGAAGGTGAATGCATACACAGCCGATAAAGACTCTCCCTTGACTCGAA
CAACTGCTGAGTTCCTCTTGAATCTTGTGCGAATGTCCCATTTTATGTAT
CTACATGGAGATGGGCATGGTGTTCAAAACCAAGAGACTATCGATGTCGG
CTTTACATTGCTTTTTCAGCCCATTCCCTTGGAGGACAAAGACATGGCTT
TCACAGCATCTCCTGGCACCAAAGGCTGATGATGAATTATAATGCACGAT
GCGTTGCGAATTCCCAGAGAGTGCAGTTTCAGTTGATGTTGGCCTCCGCT
TTTCTTTTTTCTGAGGGATCTCTTTTCGATAATAAAATAAATTCCCTCAT
TCATCAAGGTTTATAAATGAAAAAGAAATGATATATATATATATATATAT
ATATATATATAT
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