CN185442

Overview
NameCN185442
Unique NameCN185442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:1..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 9.080e-73
Identity = 133/162 (82.10%), Postives = 146/162 (90.12%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 649
            MAPIAVGD +PDG +++FDE DQLQ  SVHSLAAGKKVILFGVPGAFTPTCS+KHVPGFIEKA+ELKSK VDEI+C SVN PFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+DDLKV  ANVESGG+FTVSSADDILKAL
Sbjct:    1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2C_ARATH (Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.195e-70
Identity = 127/162 (78.40%), Postives = 144/162 (88.89%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 649
            MAPI VGD +PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVN PFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVESGG+FTVSSA+DILKAL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILKAL 162          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2D_ARATH (Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.357e-68
Identity = 125/162 (77.16%), Postives = 143/162 (88.27%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 649
            MAPI VGD +PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVN PFVMKAW KT+ ENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVE+GG+FTVSSA+DILKAL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.395e-65
Identity = 121/162 (74.69%), Postives = 140/162 (86.42%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 649
            MAP+AVGD LPDG L +FD +D+LQQVSVH LAAGKKV+LFGVPGAFTPTCS +HVPGFI +A++LK+K VD+IL +SVN PFVMKAWAK++PENK VKFLADG   YT ALGLELDLSEKGLG RSRRFALL D+LKV  AN+E GG FT+S A++ILKAL
Sbjct:    1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL 162          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2A_ARATH (Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.037e-48
Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = -3
Query:  203 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGD 649
            MAPI VGD +PDG +++FD+ DQLQ VSVHSLAAGKKVILFGVPGAF PTCS+ HV GFIEKA+ELKS  VDEI+C+S + PF++ A +    ENK VKF+ DGS +Y   LGLEL++ +KGLG RSR FALL+D+LKV   NV SGGD
Sbjct:    1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFIEKAEELKSNGVDEIICLSGDDPFMITACS----ENKHVKFVEDGSGEYIQLLGLELEVKDKGLGVRSRGFALLLDNLKVIVVNVGSGGD 145          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.247e-46
Identity = 94/164 (57.32%), Postives = 120/164 (73.17%), Query Frame = -3
Query:  164 APIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 646
            A IAVGD LPD  L+YFD  D +L+ V+V  L AGKKV+LF VPGAFTPTC+ KHVPGF+ KA EL++K VD + C+SVN  FVM+AW ++      V  L+DG+ +   A+G+ELDLS+K  GLG RSRR+ALL +D  VK  N+E GG FT SSA+++LKAL
Sbjct:   69 ATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLKAL 232          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2E_ARATH (Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.614e-45
Identity = 97/164 (59.15%), Postives = 117/164 (71.34%), Query Frame = -3
Query:  164 APIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 646
            A I+VGD LPD  L+Y D     ++ V+V SL AGKK ILF VPGAFTPTCS KHVPGF+ KA EL+SK +D I CISVN  FVM+AW K    N  V  L+DG+ ++T  LG+ELDL +K  GLG RSRR+A+L DD  VK  N+E GG FT SSA+D+LKAL
Sbjct:   71 ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLKAL 234          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PR2E2_ORYSJ (Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.753e-45
Identity = 97/166 (58.43%), Postives = 122/166 (73.49%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 649
            +A IAVGD LPD  L+YFD  D +L+ V+V  L AG+K +LF VPGAFTPTCS KH+PGFIEKA EL +K VD I C+SVN  FVM+AW ++    +  V  L+DG+ + T ALG+E+DLS+K  GLG RSRR+ALL DD  VK  N+E GG FT SSA+++LKAL
Sbjct:   60 VATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL 225          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.532e-27
Identity = 65/166 (39.16%), Postives = 94/166 (56.63%), Query Frame = -3
Query:  164 VGDPLPDGILAYFDEQDQLQQVSV---------HSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 634
            +G  +P+   AY     +L+   V         H    GKKV++  VPGAFTPTC+  HVP ++EK  ELKSK VDE++ IS N PFV+ AW  T     ++ F  D + +++      LDLS KG+G R+ R+AL+ +DLKV+   ++  G+   SSA  +L  L
Sbjct:    2 IGSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.420e-25
Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = -3
Query:  173 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDIL 547
            GKKV++FG+PGA+T  CS  HVP +    D+LK+K VD ++C+SVN P+ +  WA+      +++F  D    +  +L LE+DLS   LG RS R++  VDD K+KA NVE +  DF VS A+ IL
Sbjct:   70 GKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVIL 195          
The following BLAST results are available for this feature:
BLAST of CN185442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2B_ARATH9.080e-7382.10Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB... [more]
PRX2C_ARATH7.195e-7078.40Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC... [more]
PRX2D_ARATH1.357e-6877.16Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID... [more]
PRX2C_ORYSJ2.395e-6574.69Peroxiredoxin-2C OS=Oryza sativa subsp. japonica G... [more]
PRX2A_ARATH2.037e-4865.77Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA... [more]
PR2E1_ORYSJ4.247e-4657.32Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa ... [more]
PRX2E_ARATH1.614e-4559.15Peroxiredoxin-2E, chloroplastic OS=Arabidopsis tha... [more]
PR2E2_ORYSJ2.753e-4558.43Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa ... [more]
MALF3_MALFU7.532e-2739.16Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PRX2F_ORYSJ1.420e-2545.24Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185442 ID=CN185442; Name=CN185442; organism=Citrus sinensis; type=EST; length=768bp
CCTTTATTCCGATAAAGATAAACAACAGTTTAAACCATTACTTCTCGCGT
CATACATAACAATATTCGAGATCCACTGGTTTATATTCATCCTAAGCATA
GCACAGCAAAAGGAAGTAATAACTCAACCAACACTAAGCAGCTGGGATGG
AACTGCAAATTTAAAGAGCCTTGAGGATGTCATCAGCACTGGAGACTGTG
AAATCTCCACCAGATTCAACATTTGCGGCCTTCACCTTGAGGTCATCAAC
CAAGAGAGCAAACCTCCTTGACCGGGTGCCAAGTCCTTTCTCACTGAGGT
CAAGCTCAAGCCCCAAAGCATGGGTGTATTTTGCTGAGCCATCAGCCAGG
AACTTCACGCTCTTGTTCTCAGGAAATGTTTTGGCCCATGCCTTCATCAC
AAATGGGGCATTAACGCTTATGCAGAGAATTTCATCGACGTCTTTTGACT
TCAACTCATCAGCCTTCTCGATGAATCCAGGCACATGCTTCAAGCTGCAA
GTAGGAGTGAAAGCACCGGGGACGCCAAAGAGGATGACCTTTTTACCGGC
AGCGAGCGAGTGTACGGACACTTGCTGCAACTGATCTTGTTCGTCGAAGT
AAGCGAGAATACCGTCCGGCAAGGGGTCACCAACTGCGATAGGAGCCATT
TAGAGATAGAATCTGATCCGCGCCTGTGATTAAATACACGATTACCACCG
TAGGGCGAGAGCTTTTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTAAAAAAAAAA
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