CN185434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185434 vs. ExPASy Swiss-Prot
Match: AGD8_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD8 OS=Arabidopsis thaliana GN=AGD8 PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.201e-60 Identity = 117/174 (67.24%), Postives = 147/174 (84.48%), Query Frame = -2 Query: 319 SSVSLPFASRFEYVDNVQSSELSSGGPQVLSHVAPPKSSSFFADYGMDNGFQKKSGS--SKVQIQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDRIL 834 SS FASRFEY D++QS S GG QVL+HVAPPKSSSFF+D+GMD+ F KKS S SK Q++E+DEARKKF+NAKSISS+Q+FGDQN + D++++ +LQKF+GSASISSAD +GHD D++++D+ ASDLINRLSFQAQQD+SSL NIAGET KKL +LAS + +DIQDR+L Sbjct: 240 SSAGSSFASRFEYNDDLQSGGQSVGGTQVLNHVAPPKSSSFFSDFGMDSSFPKKSSSNSSKSQVEESDEARKKFTNAKSISSAQYFGDQNKNADLESKATLQKFAGSASISSADFYGHDQDDSNIDITASDLINRLSFQAQQDLSSLVNIAGETKKKLGTLASGIFSDIQDRML 413
BLAST of CN185434 vs. ExPASy Swiss-Prot
Match: AGD9_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD9 OS=Arabidopsis thaliana GN=AGD9 PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.820e-56 Identity = 111/176 (63.07%), Postives = 143/176 (81.25%), Query Frame = -2 Query: 319 NTSSVSLPFASRFEYVDNVQSSELSSGGPQVLSHVAPPKSSSFFADYGMDNGFQKKSGSS--KVQIQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDRIL 840 +TS+ FASRFEY D+ QS S G +VLSHVAPPKSS+FF ++GMD+ F KKS SS K Q++ETDEARKKFSNAKSISS+QFFG+QN D+D++ +LQKFSGSA+ISS+DLFGH D++++D+ ASDLINR+SFQAQQD+SS+ N+A ET KL + ASS+ +D+QDR+L Sbjct: 229 DTSAAGSSFASRFEYFDDEQSGGQS--GTRVLSHVAPPKSSNFFNEFGMDSAFPKKSSSSSSKAQVEETDEARKKFSNAKSISSAQFFGNQNRDADLDSKATLQKFSGSAAISSSDLFGHGPDDSNIDITASDLINRISFQAQQDMSSIANLAEETKNKLGTFASSIFSDLQDRML 402
BLAST of CN185434 vs. ExPASy Swiss-Prot
Match: AGD10_ARATH (ADP-ribosylation factor GTPase-activating protein AGD10 OS=Arabidopsis thaliana GN=AGD10 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.927e-48 Identity = 107/169 (63.31%), Postives = 129/169 (76.33%), Query Frame = -2 Query: 346 NTSSVSLPFASRFEYVDNVQSSELSSGGPQVLSHVAPPKSSSFFADYGMDNG--FQKK--SGSSKVQIQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSL 840 + S F+SRF+Y DNVQ+ E PQV+SHVAPPKSS FF + NG FQKK + SSK+QIQETDEARKKF+NAKSISS+Q+FG+ NNS D++ + SL+KFSGS++ISSADLFG + LDL A DL+NRLS QAQQDISSLKN+A ET KKL S+ASSL Sbjct: 226 SAKSARSSFSSRFDYADNVQNRE-DYMSPQVVSHVAPPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETDEARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGDGDFPLDLTAGDLLNRLSLQAQQDISSLKNMAEETKKKLGSVASSL 393
BLAST of CN185434 vs. ExPASy Swiss-Prot
Match: ARFG3_PONAB (ADP-ribosylation factor GTPase-activating protein 3 OS=Pongo abelii GN=ARFGAP3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 325 IQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDR 651 ++ TDEA+KKF N K+ISS +FG Q + D +T+ L++ S S+SISSADLF A+ + + S ++ AQ ++++AG KLS A+ ++T IQDR Sbjct: 411 VENTDEAQKKFGNVKAISSDMYFGRQAQA-DYETRARLERLSASSSISSADLFEEQRKQAAGNYSLSSVLPNAPDMAQFK-QGVRSVAG----KLSVFANGVVTSIQDR 513
BLAST of CN185434 vs. ExPASy Swiss-Prot
Match: ARFG3_MACFA (ADP-ribosylation factor GTPase-activating protein 3 OS=Macaca fascicularis GN=ARFGAP3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.894e-12 Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 325 IQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDR 651 ++ TDEA+KKF N K+ISS +FG Q + D +T+ L++ S S+SISSADLF A+ + + S+++ AQ ++++AG KLS A+ ++T IQDR Sbjct: 411 VENTDEAQKKFGNVKAISSDMYFGRQAQA-DYETRARLERLSASSSISSADLFEEQRKQAAGNYSLSNVLPSAPNMAQFK-QGVRSVAG----KLSVFANGVVTSIQDR 513
BLAST of CN185434 vs. ExPASy Swiss-Prot
Match: ARFG3_HUMAN (ADP-ribosylation factor GTPase-activating protein 3 OS=Homo sapiens GN=ARFGAP3 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11 Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 325 IQETDEARKKFSNAKSISSSQFFGDQNNSIDMDTQVSLQKFSGSASISSADLFGHDSDNASLDLAASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASSLITDIQDR 651 ++ TDEA+KKF N K+ISS +FG Q+ + D +T+ L++ S S+SISSADLF + + + S ++ AQ ++++AG KLS A+ ++T IQDR Sbjct: 411 VENTDEAQKKFGNVKAISSDMYFGRQSQA-DYETRARLERLSASSSISSADLFEEPRKQPAGNYSLSSVLPNAPDMAQFK-QGVRSVAG----KLSVFANGVVTSIQDR 513 The following BLAST results are available for this feature:
BLAST of CN185434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185434 ID=CN185434; Name=CN185434; organism=Citrus sinensis; type=EST; length=841bpback to top |