DC887863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.494e-40 Identity = 82/108 (75.93%), Postives = 91/108 (84.26%), Query Frame = -1 Query: 121 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 444 +F IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT+TREK+KITVT+D FS KHNVRDWLRVIA+NKDR++YELRYFNIAENEGEEED Sbjct: 17 SFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.157e-39 Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = -1 Query: 121 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 444 +F IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV++TREK+KITVT+D FS KHNVRDWLRVIA+NKDR++YELRYFNIAENE EEED Sbjct: 17 SFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEAEEED 124
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.713e-28 Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = -1 Query: 121 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 444 +FVIDC KPV+D I++IA+LEKFLQERIKV GKAGALG+SV++TR KI V ++SNFS K+N+RDWLRVIASNKD++VYE+RYF I + E+ Sbjct: 19 SFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 9.729e-24 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS K+N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_PIG (60S ribosomal protein L22 OS=Sus scrofa GN=RPL22 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.660e-23 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS K+N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_MOUSE (60S ribosomal protein L22 OS=Mus musculus GN=Rpl22 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.660e-23 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS K+N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_MACFA (60S ribosomal protein L22 OS=Macaca fascicularis GN=RPL22 PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 1.660e-23 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS K+N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_HUMAN (60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.660e-23 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS K+N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_ICTPU (60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 2.167e-23 Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG V++ R K+KITVTSD FS K+N+RDWLRV+A+ K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEEEED 126
BLAST of DC887863 vs. ExPASy Swiss-Prot
Match: RL22_CHICK (60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.828e-23 Identity = 59/108 (54.63%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 121 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 441 F +DC PVED IMD A+ E+FLQERIKV GKAG LG VT+ R K+KITVTS+ FS K+N+RDWLRV+A++K+ YELRYF I ++E EEE+ Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEEE 126 The following BLAST results are available for this feature:
BLAST of DC887863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887863 ID=DC887863; Name=DC887863; organism=Citrus sinensis; type=EST; length=501bpback to top |