CN185427

Overview
NameCN185427
Unique NameCN185427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GTJ_ARATH (Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 3.606e-69
Identity = 120/172 (69.77%), Postives = 141/172 (81.98%), Query Frame = -2
Query:  263 TVAICEYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVPQGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNS-TKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 775
            TVAICEYGA  L+AK+IMKCDDDTFV++DAV++E K  P   SLY+GN+NY+HKPLR GKW+VT           YANGPGYILS+DI++ IV EFE HKLR+FKMEDVS+GMWVEQFN+ TKPV Y+HSL+FCQFGCIE Y TAHYQSPRQMICLW+KL + G  QCCN+R
Sbjct:  510 TVAICEYGAHQLAAKFIMKCDDDTFVQVDAVLSEAKKTPTDRSLYIGNINYYHKPLRQGKWSVTYEEWPEEDYPPYANGPGYILSNDISRFIVKEFEKHKLRMFKMEDVSVGMWVEQFNNGTKPVDYIHSLRFCQFGCIENYLTAHYQSPRQMICLWDKLVLTGKPQCCNMR 681          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GTI_ARATH (Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.151e-69
Identity = 122/172 (70.93%), Postives = 139/172 (80.81%), Query Frame = -2
Query:  263 TVAICEYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVPQGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQF-NSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 775
            TVAICE+GA   SAKYIMKCDDDTFV+L AV+NEVK VP+G SLY+GN+NY+HKPLR GKWAVT           YANGPGY+LSSDIA+ IV +FE HKLRLFKMEDVS+GMWVE F N+T PV Y HSL+FCQFGC+E YYTAHYQSPRQMICLW+KL      +CCN+R
Sbjct:  501 TVAICEHGALAFSAKYIMKCDDDTFVKLGAVINEVKKVPEGRSLYIGNMNYYHKPLRGGKWAVTYEEWPEEDYPPYANGPGYVLSSDIARFIVDKFERHKLRLFKMEDVSVGMWVEHFKNTTNPVDYRHSLRFCQFGCVENYYTAHYQSPRQMICLWDKLLRQNKPECCNMR 672          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GTH_ARATH (Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 1.049e-68
Identity = 119/171 (69.59%), Postives = 138/171 (80.70%), Query Frame = -2
Query:  263 TVAICEYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVPQGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 775
            TVAICEYG  T++AKY+MKCDDDTFVR+DAV+ E + V    SLY+GN+N++HKPLR GKWAVT           YANGPGYILS D+AK IV +FE  +LRLFKMEDVSMGMWVE+FN T+PV  VHSLKFCQFGCIE Y+TAHYQSPRQMIC+W+KLQ LG  QCCN+R
Sbjct:  503 TVAICEYGVNTVAAKYVMKCDDDTFVRVDAVIQEAEKVKGRESLYIGNINFNHKPLRTGKWAVTFEEWPEEYYPPYANGPGYILSYDVAKFIVDDFEQKRLRLFKMEDVSMGMWVEKFNETRPVAVVHSLKFCQFGCIEDYFTAHYQSPRQMICMWDKLQRLGKPQCCNMR 673          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GTK_ARATH (Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.401e-57
Identity = 103/172 (59.88%), Postives = 129/172 (75.00%), Query Frame = -2
Query:  263 TVAICEYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVPQGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFN-STKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 775
            T+AICE+G + ++A YIMKCDDDTF+R+++++ ++  V    SLY+GN+N  H+PLR GKW VT           YANGPGYI+SS+IAK IVS+   HKLRLFKMEDVSMG+WVEQFN S +PV+Y HS KFCQ+GC   YYTAHYQSP QM+CLW+ L + G  QCCN R
Sbjct:  514 TIAICEFGVQNVTAPYIMKCDDDTFIRVESILKQIDGVSPEKSLYMGNLNLRHRPLRTGKWTVTWEEWPEAVYPPYANGPGYIISSNIAKYIVSQNSRHKLRLFKMEDVSMGLWVEQFNASMQPVEYSHSWKFCQYGCTLNYYTAHYQSPSQMMCLWDNL-LKGRPQCCNFR 684          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GTG_ARATH (Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.431e-33
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = -2
Query:  272 TVAICEYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVPQGNSLYVGNVNYHHKPLRH--GKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNST-KPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCC 775
            TVA+C  G + + AKYIMK DDD FVR+D +++ ++  P    LY G +++   P R    KW +            +A+GPGYI+S DIAK +V       L LFK+EDV+MG+W++QFN T K VKY++  +F    C   Y   HYQ+PR ++CLW KLQ    + CC
Sbjct:  449 TVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLEERPSSALLY-GLISFDSSPDREQGSKWFIPKEEWPLDSYPPWAHGPGYIISHDIAKFVVKGHRQRDLGLFKLEDVAMGIWIQQFNQTIKRVKYINDKRFHNSDCKSNYILVHYQTPRLILCLWEKLQKENQSICC 618          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GTF_ARATH (Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.254e-29
Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = -2
Query:  272 TVAICEYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVPQGNSLYVGNVNYHHKPLRH--GKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQF--NSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCC 775
            T+AIC +G    SAK+IMK DDD FVR+D V+  +        L  G +N   +P+R+   KW ++           +A+GPGYI+S DIA+S+   F+   L++FK+EDV+MG+W+ +   +  +P  Y +  +    GC +GY  AHYQSP +M CLW K Q    + CC
Sbjct:  470 TLAICIFGTEVDSAKFIMKTDDDAFVRVDEVLLSLSMTNNTRGLIYGLINSDSQPIRNPDSKWYISYEEWPEEKYPPWAHGPGYIVSRDIAESVGKLFKEGNLKMFKLEDVAMGIWIAELTKHGLEP-HYENDGRIISDGCKDGYVVAHYQSPAEMTCLWRKYQETKRSLCC 640          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GL2_HUMAN (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Homo sapiens GN=B3GALNT2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.819e-12
Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = -2
Query:  263 TLSAKYIMKCDDDTFVRLDAVVNEV--KNVPQGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 745
            T S   ++K DDD ++ L+AV N +  KN+  G + + GN   +    R GKW              +A G GY++S DI K + S   S +L+ ++ EDVSMG+W+       P +Y  SL  C+  C  G  ++   SP ++  LW   +  G+   C  R
Sbjct:  346 TTSFNLLLKTDDDCYIDLEAVFNRIVQKNL-DGPNFWWGNFRLNWAVDRTGKWQ--ELEYPSPAYPAFACGSGYVISKDIVKWLASN--SGRLKTYQGEDVSMGIWMAAIG---PKRYQDSLWLCEKTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR 500          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GL2_XENTR (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Xenopus tropicalis GN=b3galnt2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.052e-12
Identity = 45/167 (26.95%), Postives = 85/167 (50.90%), Query Frame = -2
Query:  263 EYGARTLSAKYIMKCDDDTFVRLDAVVNEVKNVP-QGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 760
            ++ A   S ++++K DDD F+ ++ V+ ++ +   Q  + + GN   +    R GKW              +A G GY++S DI + + S   S +L+ ++ EDVSMG+W+   ++  P +Y  S   C+  C  G  ++   +P++++ LW + +  GN   C  R
Sbjct:  329 QWTAEFTSFEFLLKTDDDCFIDIENVLEKIAHKQLQKENTWWGNFRLNWAVDRTGKWQ--ELEYLSPAYPAFACGSGYVISQDIVQWLASN--SQRLKTYQGEDVSMGIWM---SAIGPSRYQDSHWLCEKKCEAGMLSSPQYTPQELLELWQQKERCGNPCACEDR 488          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GL2_XENLA (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Xenopus laevis GN=b3galnt2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.480e-11
Identity = 44/158 (27.85%), Postives = 79/158 (50.00%), Query Frame = -2
Query:  263 KYIMKCDDDTFVRLDAVVNEVKNVP-QGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 733
            ++++K DDD F+ +D V+  V     Q  + + GN   +    R GKW              +A G GYI+S+DI + +     S +L+ ++ EDVSMG+W+   ++  P +Y  S   C+  C  G  ++   +P++++ +W + +  GN   C  R
Sbjct:  336 EFLLKTDDDCFIDIDNVLKMVAQKELQKENAWWGNFRLNWAVDRTGKWQ--ELEYLSPAYPAFACGSGYIISNDIVQWLA--VNSQRLKTYQGEDVSMGIWM---SAIGPSRYQDSRWLCEKKCEAGMLSSPQYTPQELMEIWQQKERCGNPCACEDR 486          
BLAST of CN185427 vs. ExPASy Swiss-Prot
Match: B3GL2_MOUSE (UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Mus musculus GN=B3galnt2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 45/157 (28.66%), Postives = 76/157 (48.41%), Query Frame = -2
Query:  263 IMKCDDDTFVRLDAVVNEV--KNVPQGNSLYVGNVNYHHKPLRHGKWAVTXXXXXXXXXXXYANGPGYILSSDIAKSIVSEFESHKLRLFKMEDVSMGMWVEQFNSTKPVKYVHSLKFCQFGCIEGYYTAHYQSPRQMICLWNKLQMLGNAQCCNIR 727
            ++K DDD ++ L+AV N +  KN+  G + + GN   +    R GKW              +A G GY++S DI   +     S +L+ ++ EDVSMG+W+       P ++  SL  C+  C  G  ++   SP ++  LW   ++ G+   C  +
Sbjct:  354 LLKTDDDCYIDLEAVFNRIAQKNL-DGPNFWWGNFRLNWAVDRTGKWQ--ELEYPSPAYPAFACGSGYVISKDIVDWLAGN--SRRLKTYQGEDVSMGIWMAAIG---PKRHQDSLWLCEKTCETGMLSSPQYSPEELSKLWELKELCGDPCQCEAK 502          
The following BLAST results are available for this feature:
BLAST of CN185427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
B3GTJ_ARATH3.606e-6969.77Probable beta-1,3-galactosyltransferase 19 OS=Arab... [more]
B3GTI_ARATH6.151e-6970.93Probable beta-1,3-galactosyltransferase 18 OS=Arab... [more]
B3GTH_ARATH1.049e-6869.59Probable beta-1,3-galactosyltransferase 17 OS=Arab... [more]
B3GTK_ARATH5.401e-5759.88Probable beta-1,3-galactosyltransferase 20 OS=Arab... [more]
B3GTG_ARATH1.431e-3342.11Probable beta-1,3-galactosyltransferase 16 OS=Arab... [more]
B3GTF_ARATH1.254e-2938.95Beta-1,3-galactosyltransferase 15 OS=Arabidopsis t... [more]
B3GL2_HUMAN1.819e-1231.29UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransfer... [more]
B3GL2_XENTR4.052e-1226.95UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransfer... [more]
B3GL2_XENLA4.480e-1127.85UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransfer... [more]
B3GL2_MOUSE9.981e-1128.66UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransfer... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185427 ID=CN185427; Name=CN185427; organism=Citrus sinensis; type=EST; length=776bp
GAGGCGATATCCAATTTCATTCTACCACAGCCATTATTGTGTAAATTACA
AAAATATGATGTGTATGAGAATGTTTCTCCAGAAGGGAAAAATTTTAAGA
GCAAGGAAAAAATGAAAGAATATGGAAAGGGCAAATGAAGGGAGAGCCTA
GATACAACTAACCAAAGAATGTACAATAAATGAATGATGGCTTTGACTGC
AAAATTTGTTCCTCTGGTTCTTCATCCTTGAGCTGCTCACTGAACATCAC
AACCATTCATCATCTAATGTTGCAGCACTGAGCATTTCCCAGCATTTGCA
ATTTGTTCCACAGGCAGATCATTTGCCTTGGAGACTGATAATGAGCCGTA
TAATAACCTTCTATGCAACCAAACTGGCAAAACTTCAAGCTGTGTACATA
CTTTACGGGTTTCGTGCTGTTGAACTGCTCTACCCACATTCCCATACTCA
CATCTTCCATCTTGAACAATCTTAATTTATGGCTCTCAAACTCAGATACT
ATGGACTTCGCTATGTCAGATGACAAAATGTAGCCTGGCCCATTGGCGTA
GGGTGGATAATCTTCCTCTGGCCACTCCTCATATGTCACAGCCCATTTAC
CATGCCGAAGGGGCTTGTGGTGGTAGTTGACGTTTCCAACGTACAAGCTG
TTGCCCTGAGGTACATTCTTCACTTCATTAACAACTGCATCTAATCTTAC
AAATGTGTCATCATCACACTTCATTATATACTTTGCAGACAGCGTACGAG
CCCCATATTCACAGATGGCAACGGTT
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