CN185417

Overview
NameCN185417
Unique NameCN185417
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185417 vs. ExPASy Swiss-Prot
Match: MMTA2_BOVIN (Multiple myeloma tumor-associated protein 2 homolog OS=Bos taurus GN=MMTAG2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22
Identity = 61/139 (43.88%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   43 MYHPTRGGVRGGRDQFSWDDVKVDKHRENYLGHSIKAPVGRWQKGKDLHWYTRENNSKGSDDALXXXXXXXXXXXXQAMREALGLA-PKRSSRPQGNRLDKHDFQELVKRSSTAEDMGAGHADAAWVHGLGFSRGAASR 456
            M+  +RGGVRGG+DQFSW+DVK DK RENYLG+S+ APVGRWQKG+DL WY     +KG  ++             QA +EAL  A   ++ + Q   L K DF E+ KR     + G        + GLG S G+  R
Sbjct:    1 MFGSSRGGVRGGQDQFSWEDVKTDKQRENYLGNSLMAPVGRWQKGRDLTWY-----AKGRANSAGLSREQELAAVRQAEQEALMAALGYKNVKKQPTGLSKEDFVEVCKREGGDPEKGVDR-----LLGLGSSSGSVGR 129          
BLAST of CN185417 vs. ExPASy Swiss-Prot
Match: MMTA2_RAT (Multiple myeloma tumor-associated protein 2 homolog OS=Rattus norvegicus GN=Mmtag2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 1
Query:   43 MYHPTRGGVRGGRDQFSWDDVKVDKHRENYLGHSIKAPVGRWQKGKDLHWYTRENNSKGSDDALXXXXXXXXXXXXQAMREALGLAPKRSSRPQGNRLDKHDFQELVKR-SSTAEDMGAGHADAAWVHGLGFSRGAASR 456
            M+  +RGGVRGG+DQF+W+DVK DK RENYLG+S+ APVGRWQKG+DL WY ++  +  +  +             +A+  ALG    ++ R Q   L K DF E+ KR     E+ G        + GLG + G+A R
Sbjct:    1 MFGSSRGGVRGGQDQFNWEDVKTDKQRENYLGNSLMAPVGRWQKGRDLTWYAKD-RAPCTGPSREEELAAVREAEREALLAALGY---KNVRKQPTGLSKEDFVEICKREGGDPEEKGVDR-----LLGLGSASGSAGR 130          
BLAST of CN185417 vs. ExPASy Swiss-Prot
Match: MMTA2_MOUSE (Multiple myeloma tumor-associated protein 2 homolog OS=Mus musculus GN=Mmtag2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21
Identity = 58/139 (41.73%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   43 MYHPTRGGVRGGRDQFSWDDVKVDKHRENYLGHSIKAPVGRWQKGKDLHWYTRENNSKGSDDALXXXXXXXXXXXXQAMREALGLAPKRSSRPQGNRLDKHDFQELVKR-SSTAEDMGAGHADAAWVHGLGFSRGAASR 456
            M+   RGGVRGG+DQF+W+DVK DK RENYLG+S+ APVGRWQKG+DL WY ++  +  +  +             +A+  ALG    ++ R Q   L K DF E+ KR     E+ G        + GLG + G+A R
Sbjct:    1 MFGSNRGGVRGGQDQFNWEDVKTDKQRENYLGNSLMAPVGRWQKGRDLTWYAKD-RAPCTGPSREEELAAVREAEREALLAALGY---KNVRKQPTGLSKEDFVEICKREGGDPEEKGVDR-----LLGLGSASGSAGR 130          
BLAST of CN185417 vs. ExPASy Swiss-Prot
Match: MMTA2_HUMAN (Multiple myeloma tumor-associated protein 2 OS=Homo sapiens GN=MMTAG2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21
Identity = 60/140 (42.86%), Postives = 78/140 (55.71%), Query Frame = 1
Query:   43 MYHPTRGGVRGGRDQFSWDDVKVDKHRENYLGHSIKAPVGRWQKGKDLHWYTRENNSKGSDDALXXXXXXXXXXXXQAMREALGLA-PKRSSRPQGNRLDKHDFQELVKR-SSTAEDMGAGHADAAWVHGLGFSRGAASR 456
            M+  +RGGVRGG+DQF+W+DVK DK RENYLG+S+ APVGRWQKG+DL WY     +KG                 +A REAL  A   ++ + Q   L K DF E+ KR     E+ G        + GLG + G+  R
Sbjct:    1 MFGSSRGGVRGGQDQFNWEDVKTDKQRENYLGNSLMAPVGRWQKGRDLTWY-----AKGRAPCAGPSREEELAAVREAEREALLAALGYKNVKKQPTGLSKEDFAEVCKREGGDPEEKGVDR-----LLGLGSASGSVGR 130          
The following BLAST results are available for this feature:
BLAST of CN185417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MMTA2_BOVIN3.242e-2243.88Multiple myeloma tumor-associated protein 2 homolo... [more]
MMTA2_RAT4.682e-2141.73Multiple myeloma tumor-associated protein 2 homolo... [more]
MMTA2_MOUSE6.115e-2141.73Multiple myeloma tumor-associated protein 2 homolo... [more]
MMTA2_HUMAN7.986e-2142.86Multiple myeloma tumor-associated protein 2 OS=Hom... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185417 ID=CN185417; Name=CN185417; organism=Citrus sinensis; type=EST; length=656bp
AGTAAGAATTCAGATCGTTCAATTCAGATCGCTCGCTCGAAAATGTATCA
TCCAACCAGGGGCGGTGTTCGTGGTGGTCGAGATCAATTTAGTTGGGACG
ATGTGAAGGTTGATAAACATCGTGAGAACTATCTAGGTCATAGCATCAAG
GCCCCTGTTGGAAGATGGCAAAAAGGAAAAGATCTACATTGGTATACCAG
AGAAAACAATTCTAAGGGTTCAGATGACGCCTTGAAAGAAGAAATAAAAA
GAATTAAGGAAGAGGAGGAGCAGGCCATGAGGGAAGCTCTTGGCTTAGCA
CCCAAGCGGTCTAGTCGACCTCAAGGAAATCGACTTGATAAGCATGATTT
TCAAGAACTTGTGAAGCGAAGTTCTACTGCAGAGGACATGGGTGCAGGGC
ATGCTGATGCAGCATGGGTTCATGGACTTGGTTTCTCAAGAGGAGCGGCA
TCTCGTCCATGGGAAGATCCTAGAACACTTCAATCCGGTCCAGAGGAGGT
TTCAACAGAGAAGGAGAAGCCTGCTGTTGCCAGCCCTCCACCTCAGAACA
TCGAAAAAGAGGAATCAGAGGATGAAAGCAGTCAAAAGAAAAGGAGGCGT
GAGGAGAAGAAGCATGAGAAGAATGAAAGACGCGAGAAGCGTCATTCTCG
TGATTT
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