DC887816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M2_MOUSE (AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.752e-16 Identity = 42/117 (35.90%), Postives = 73/117 (62.39%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ +I+ Q+P +L+ LT + GT K+ +W +G+I K PSL GTM L+ G PT ++F+I +A+SGL++++LD+ + +KG + +T+AG+++VR+ Sbjct: 302 GKTIEGVIVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMGLQVGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M2_HUMAN (AP-3 complex subunit mu-2 OS=Homo sapiens GN=AP3M2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.098e-16 Identity = 41/117 (35.04%), Postives = 72/117 (61.54%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ + + Q+P +L+ LT + GT K+ +W +G+I K PSL GTM L+ G PT ++F+I +A+SGL++++LD+ + +KG + +T+AG+++VR+ Sbjct: 302 GKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M2_RAT (AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.658e-16 Identity = 41/117 (35.04%), Postives = 72/117 (61.54%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ + + Q+P +L+ LT + GT K+ +W +G+I K PSL GTM L+ G PT ++F+I +A+SGL++++LD+ + +KG + +T+AG+++VR+ Sbjct: 302 GKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMGLQVGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M1_PONAB (AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 39/117 (33.33%), Postives = 71/117 (60.68%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ I + +P +L+ +LT G+ K+ TW +G+I K PSL G + L++G P+ ++F+I +A+SGL++++LD+ + +KG + VT+AG+++VR+ Sbjct: 302 GKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQKLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M1_HUMAN (AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 39/117 (33.33%), Postives = 71/117 (60.68%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ I + +P +L+ +LT G+ K+ TW +G+I K PSL G + L++G P+ ++F+I +A+SGL++++LD+ + +KG + VT+AG+++VR+ Sbjct: 302 GKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQKLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M1_BOVIN (AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15 Identity = 39/117 (33.33%), Postives = 71/117 (60.68%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ I + +P +L+ +LT G+ K+ TW +G+I K PSL G + L++G P+ ++F+I +A+SGL++++LD+ + +KG + VT+AG+++VR+ Sbjct: 302 GKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQKLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M1_CHICK (AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.316e-15 Identity = 34/117 (29.06%), Postives = 72/117 (61.54%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKT++ +++ +P +L+ +LT+ G+ K+ W +G+I K P+L G + L++G P+ ++F+I +A+SGL++++LD+ + +KG + +T+AG+++VR+ Sbjct: 302 GKTVEGVVMTVHMPKAVLNMNLTATQGSYTFDPVTKVLAWDVGKITPQKLPNLKGIVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYITKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M1_MOUSE (AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15 Identity = 38/117 (32.48%), Postives = 69/117 (58.97%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ I + +P +L+ +LT G+ K+ W +G+I K PSL G + L++G P ++F+I +A+SGL++++LD+ + +KG + VT+AG+++VR+ Sbjct: 302 GKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLAWDVGKITPQKLPSLKGLVNLQSGAPKPEENPNLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP3M1_RAT (AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.256e-14 Identity = 37/117 (31.62%), Postives = 69/117 (58.97%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GKTI+ I + +P +L+ +LT G+ K+ W +G+I K PSL G + L++G P ++F+I +A+SGL++++LD+ + +KG + +T+AG+++VR+ Sbjct: 302 GKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLAWDVGKITPQKLPSLKGLVNLQSGAPKPEENPNLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYITKAGKFQVRT 418
BLAST of DC887816 vs. ExPASy Swiss-Prot
Match: AP1M_DISOM (AP-1 complex subunit mu OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.063e-13 Identity = 38/117 (32.48%), Postives = 70/117 (59.83%), Query Frame = -1 Query: 164 GKTIDSIILQFQLPPCILSADLTSNHGTVNVLS-NKICTWSIGRIPKDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGVALSGLQIDKLDLQNVPNRLYKGFRAVTRAGEYEVRS 511 GK +++I++ +P +L+ LT+ G K+ W IG+I K P+L G + L++G PT ++FRI +A+SGL++++LD+ + +KG + VT+AG+++VR+ Sbjct: 302 GKVVENILVIIHMPKVVLNMTLTAAQGNFTFDPVTKVLIWDIGKIILPKLPTLKGLINLQSGEAKPEENPTLNIQFRIQQLAVSGLKVNRLDMYGERYKPFKGVKYVTKAGKFQVRT 418 The following BLAST results are available for this feature:
BLAST of DC887816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887816 ID=DC887816; Name=DC887816; organism=Citrus sinensis; type=EST; length=535bpback to top |