CN185320

Overview
NameCN185320
Unique NameCN185320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.165e-22
Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = -3
Query:  267 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCG 464
            MSDTCGN DCAD++QCVKKGSSY A+++ET+ S ++  VVMD  AAE +G CKCGP+C C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = -3
Query:  270 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTC 464
            MSD CGN DCAD SQCVKKG+S   ++VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.534e-17
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = -3
Query:  264 TCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCGS 455
            TCGN DC D+SQCVKKG+SY  ++VET+ S+V  V+V   +AAE +G CKCG  C C +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = -3
Query:  267 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCG 464
            MS  C N DCAD +QCVKKG+SY   +VET+   + TV V D  AAE +G CKCG  C CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15
Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = -3
Query:  270 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTC 464
            MS  C N DC+D SQC KKG S+   +VET+   + TV+ MD  AAE  GNCKCGP+C CV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = -3
Query:  267 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCG 464
            MSD CGN DCAD+SQCVKKG+SY   +VE + S        +V A E  G CKCG +C C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = -3
Query:  267 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCG 464
            MSD CGN DCAD+SQCVKKG+SY   +VE + S        +V A E  G CKCG +C C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.275e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = -3
Query:  267 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCG 464
            MSD CGN DCAD+SQCVKKG+SY   +V+ + S     +  +V   E +G CKC   C C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of CN185320 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.846e-12
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = -3
Query:  267 MSDTCGNWDCADRSQCVKKGSSYAAELVETDLSFVSTVVVMDVQAAETEGNCKCGPTCGCVNCTCG 464
            MSD CG+ DCAD+SQCVKKG+SY   +V+ + S     +  +V   E +G CKC   C C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of CN185320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA5.165e-2266.67Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE5.003e-1764.62Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC8.534e-1756.25Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_MALDO3.585e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3_PRUAV4.683e-1555.38Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3A_ORYSJ1.362e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.362e-1453.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ1.275e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI4.846e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185320 ID=CN185320; Name=CN185320; organism=Citrus sinensis; type=EST; length=637bp
CCTATTAAAATTCAACCACACAAGGCCACGGTCATGGCCCCGGCCATATA
TTACATGATTATGAAGAACCGAAACACATAACATTACGAGTGATGGGTGA
CACAACACGCACATCACTCCACACACTAGTAGTAGACCATCATAAAAACG
AAGTAGAGAATTTTTCTTTTTTTTTAATCACCCTTACATTATTCTTAACC
CCCACAATATTTAGGCACACTTGCAGCTTCTTATTTTTTGCTGCATGGGT
TTGCTTATTAGTGACTACCACAAGTGCAGTTCACACAACCGCAGGTGGGG
CCGCACTTGCAGTTACCTTCAGTCTCAGCAGCCTGAACGTCCATGACAAC
AACGGTGCTGACAAAGCTCAAGTCAGTCTCCACCAATTCAGCAGCATAGC
TGCTTCCCTTCTTCACACACTGGCTCCTGTCAGCGCAATCCCAATTGCCG
CAAGTGTCCGACATGTTGATTGAGCTTAGAACTTGGAATTTAAAACTGGA
AATAGAGGGCTCTTTATTGTACGAAACTTGCGCATCTAATCTTTCAAAAG
GAATTCATTTTGAGCTTCCCAGCTCGGTTTCTTTAACTGAAAGCGTTGAT
TTACAACATCAACAGATTCCGCACACACCGAGTTTTT
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