CN185318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP6_ARATH (Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana GN=UBP6 PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 6.060e-63 Identity = 123/180 (68.33%), Postives = 137/180 (76.11%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 +FVRFFWKRESNQKAKILRKVDYPL LD++D CS+DLRKKL+APRQKLR+ S + KD+DVKMT Q+G T ++KETH+TGIYDLVAVLTHKGRSADSGHYVAWVKQ SGKWI+YDDDNP QREEDITKLSGGGDWHMAYI MYKAR +SM Sbjct: 307 QFVRFFWKRESNQKAKILRKVDYPLVLDIFDLCSEDLRKKLEAPRQKLREEEGKKLGLQTSAKSGS-KDSDVKMTDAEASANGSGESSTVNP-QEG--TSSEKETHMTGIYDLVAVLTHKGRSADSGHYVAWVKQESGKWIQYDDDNPSMQREEDITKLSGGGDWHMAYITMYKARFVSM 482
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP7_ARATH (Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana GN=UBP7 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.869e-58 Identity = 118/184 (64.13%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKET----HLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 +FVRFFWKRESNQKAKILRKVDYPLELD+YD CS+DLRKKL+APRQKLRD SS+ K +DVKMT Q G ++ D++ H+TGIYDLV+VLTHKGRSADSGHYVAWVKQ SGKW++YDD N QR EDI KLSGGGDWHMAYI MYKAR ISM Sbjct: 306 QFVRFFWKRESNQKAKILRKVDYPLELDIYDLCSEDLRKKLEAPRQKLRDIEGQKLGLQASAKSSS-KGDDVKMTDAEGSSN-----------QSGESSTGDQQEGASPHMTGIYDLVSVLTHKGRSADSGHYVAWVKQESGKWVQYDDANTSLQRGEDIIKLSGGGDWHMAYIVMYKARLISM 477
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP14_MOUSE (Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus GN=Usp14 PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 63/180 (35.00%), Postives = 98/180 (54.44%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 + VRFF+K + + AK+L+ V +PL LDVY+ C+ +L++K+ + R K +D N ++K + + D ++ G YDL AVLTH+GRS+ SGHYV+WV++ +WI++DDD EDI +LSGGGDWH+AY+ +Y R + + Sbjct: 327 QMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNANDKNSPPKEIKY--------------------EPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVRRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEI 486
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP14_BOVIN (Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos taurus GN=USP14 PE=2 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27 Identity = 65/180 (36.11%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 + VRFF+K + + AK+L+ V +PL LDVY+ C+ +L++K+ + R K +D + K N T D + ++ G YDL AVLTH+GRS+ SGHYV+WVK+ +WI++DDD EDI +LSGGGDWH+AY+ +Y R + + Sbjct: 327 QMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDL-------------EDKKVNQQPKTGDKDSSPQKEVKYEPFSFADDIGSNN------CGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEI 487
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP14_PANTR (Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes GN=USP14 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 + VRFF+K + + AK+L+ V +PL LD+Y+ C+ +L++K+ + R K +D + K N T D + ++ G YDL AVLTH+GRS+ SGHYV+WVK+ +WI++DDD EDI +LSGGGDWH+AY+ +Y R + + Sbjct: 327 QMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDL-------------EDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNN------CGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEI 487
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP14_HUMAN (Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27 Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 + VRFF+K + + AK+L+ V +PL LD+Y+ C+ +L++K+ + R K +D + K N T D + ++ G YDL AVLTH+GRS+ SGHYV+WVK+ +WI++DDD EDI +LSGGGDWH+AY+ +Y R + + Sbjct: 327 QMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDL-------------EDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNN------CGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEI 487
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP14_RABIT (Ubiquitin carboxyl-terminal hydrolase 14 OS=Oryctolagus cuniculus GN=USP14 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 6.998e-27 Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 3 Query: 3 EFVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM 542 + VRFF+K + + AK+L+ V +PL LDVY+ C+ +L++K+ + R K +D +S+ K + K + + D ++ G YDL AVLTH+GRS+ SGHYV+WVK+ +WI++DDD EDI +LSGGGDWH+AY+ +Y R + + Sbjct: 326 QMVRFFYKEKESVNAKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDIEDKKVNQQPN--ASDKKSSPQKEVRY-----------------EPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKHDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEI 486
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP14_CAEEL (Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenorhabditis elegans GN=usp-14 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.011e-25 Identity = 67/186 (36.02%), Postives = 94/186 (50.54%), Query Frame = 3 Query: 12 RFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDT----DKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGS-GKWIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSISM*SDL 554 RFF+K + AKIL+ V +P++LD YD CS +L+ KL A R ++ + D K+ DGV T D ++ +G YDL ++THKGRS+ GHYVAW++ GKW +DD++ EE I K SGGGDWH AY+ +Y+AR I +L Sbjct: 300 RFFYKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKLVARRADIK------------------LEEDAKLERELRKKVLDKEQGDKIF-DDGVALPTAFEDDAGSNNSGFYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTVVDEEAILKTSGGGDWHSAYVLLYEARVIKQFPEL 466
BLAST of CN185318 vs. ExPASy Swiss-Prot
Match: UBP6_SCHPO (Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces pombe GN=ubp6 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22 Identity = 61/180 (33.89%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 6 FVRFFWKRESNQKAKILRKVDYPLELDVYDFCSDDLRKKLDAPRQKLRDXXXXXXXXXXXXXSSNLKDNDVKMTXXXXXXXXXXXXXXXXXXQDGVTTDTDKETHLTGIYDLVAVLTHKGRSADSGHYVAWVKQGSGK--WIEYDDDNPLPQREEDITKLSGGGDWHMAYICMYKARSIS 539 FVRF+WK +KAKILRKV +P ELD +FC+ +L +KL R KLR+ ++ ++ + + D+ + TG+YDLV VL+H G SA SGHY AW++ + + W ++D E I L GGG+ AYI +YKA+ I+ Sbjct: 291 FVRFYWKASIGKKAKILRKVKFPFELDAVEFCTPELSQKLIPVRDKLREIEKNDEEHERAAKRIKIQPSEDEKEAEAECRLTQVATCQSLVDPE---LADDEGANPTGLYDLVGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKVSIVPAEKIETLDGGGEADSAYILLYKAKDIA 467 The following BLAST results are available for this feature:
BLAST of CN185318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185318 ID=CN185318; Name=CN185318; organism=Citrus sinensis; type=EST; length=737bpback to top |