EY666545

Overview
NameEY666545
Unique NameEY666545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.456e-94
Identity = 160/212 (75.47%), Postives = 180/212 (84.91%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHAN--VENGKVVFFPWTETDFRPGEAPWW 704
            K G+ CPS A LVKP RTQM  +   GMKI CQATSIPADRVPDM KR+ +NLLLLGA+SLPT  MLVPY +F  PPG GS+ GGT AKDA+GND++A +WL TH PGDRTLT+GLKGDPTYLVVEKD+TLA++ INAVCTHLGCVVP+N AENKFICPCHGSQYN+QGRVVRGPAPLSLALAH +  VE+GKVVF PW ETDFR G+APWW
Sbjct:   18 KSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPDMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKTHAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWW 229          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_ARATH (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Arabidopsis thaliana GN=petC PE=1 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 2.107e-93
Identity = 158/213 (74.18%), Postives = 180/213 (84.51%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFFPWTETDFRPGEAPWW 704
            +  +   S    VKP +   QMV K  +G++I CQA+SIPADRVPDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G  GGGT AKDA+GND++AA+WL THGPGDRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYN QGRVVRGPAPLSLALAHA++ E GKV+F PW ETDFR G+APWW
Sbjct:   16 RSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRVPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWW 228          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2)

HSP 1 Score: 339.732 bits (870), Expect = 1.365e-92
Identity = 160/212 (75.47%), Postives = 181/212 (85.38%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPARTQMVTKNPM--GMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704
            K GMF PS A L K  R  ++       GMK+ CQATSIPAD VPDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+  GGT AKDA+GND+IAA+WL TH PGDRTLT+GLKGDPTYLVVE DKTLA++GINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAH +V++GKVVF PWTETDFR GEAPWW
Sbjct:   18 KNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWW 228          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.669e-90
Identity = 154/211 (72.99%), Postives = 171/211 (81.04%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFFPWTETDFRPGEAPWW 704
            K G + PSRA L K AR     K  +  K+ CQATSIPADRVPDMGKRQ MNLLLLGA+SLPT  ML+PY  FF PP  G  GGG  AKDA+GNDI+AA WL THGPGDRTL +GL+GDPTYLVVE D++LA+YGINAVCTHLGCVVPWN AENKF+CPCHGSQYNNQG+VVRGPAPLSLAL+H ++ E GKVVF PW ETDFR GE PWW
Sbjct:   19 KNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRVPDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWLKTHGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHGSQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWW 229          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum GN=petC2 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 2.410e-89
Identity = 158/215 (73.49%), Postives = 180/215 (83.72%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704
            K G+   S+  L+KP +   +  + +G    MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT  MLVPYATFFAPPG G   GGT AKDA+GND+IA++WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA++++GKVVF PW ETDFR GEAPWW
Sbjct:   16 KSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWW 227          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 4.546e-88
Identity = 156/215 (72.56%), Postives = 177/215 (82.33%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704
            K G+   S+  LVKP +   +  + +G    MK+KC ATSIPAD RVPDM KR LMNLLLLGA+SLPT  MLVPY TFF PPG G   GGT AKDA+GND+IA++WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICPCHGSQYNNQGRVVRGPAPLSLALAHA++++GKVVF PW ETDFR GE PWW
Sbjct:   16 KSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPADDRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWW 227          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.323e-87
Identity = 155/215 (72.09%), Postives = 175/215 (81.40%), Query Frame = 3
Query:   75 KGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD-RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704
            K G+   S+A LVKP +   +  + MG    MK KC A SIPAD RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG G    GT AKDA GND++  +WL TH PG RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQG+VVRGPAPLSLALAHA++++GKVVF PW ETDFR G++PWW
Sbjct:   18 KSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPADDRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWW 229          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_ORYSJ (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza sativa subsp. japonica GN=petC PE=1 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 1.120e-86
Identity = 153/209 (73.21%), Postives = 171/209 (81.82%), Query Frame = 3
Query:   90 CPSRAFLVKPARTQMVTKNPM---GMKIKCQA-TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704
            C SRA L KP +     +  +      I CQA +SIPADRVPDMGKRQLMNLLLLGA+SLPT  MLVPY  FF P G G+AGGG  AKD +GND++A +WL THGP DRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKFICPCHGSQYNNQGRVVRGPAPLSLAL HA+V++GKV+F PW ETDFR G+ PWW
Sbjct:   16 CRSRASLGKPVKGLGFGRERVPRTATTITCQAASSIPADRVPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEWLKTHGPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWW 224          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRIA_WHEAT (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Triticum aestivum GN=petC PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.371e-83
Identity = 145/206 (70.39%), Postives = 163/206 (79.13%), Query Frame = 3
Query:   90 CPSRAF-LVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFFPWTETDFRPGEAPWW 704
            C +RA  L KP +     +  +   I C A SI ADRVPDM KR+LMNLLLLGA+SLPT  MLVPY +F  P G GS  GG  AKD +GNDI+  DWL THGP DRTL +GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKF+CPCHGSQYNNQG+VVRGPAPLSLAL HA+V++GKVVF PW ETDFR G+ PWW
Sbjct:   16 CRTRASSLCKPVKGLGFGRERIPRNITCMAGSISADRVPDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWLKTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHGSQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWW 221          
BLAST of EY666545 vs. ExPASy Swiss-Prot
Match: UCRI_MICAN (Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis aeruginosa (strain NIES-843) GN=petC PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.520e-67
Identity = 116/170 (68.24%), Postives = 136/170 (80.00%), Query Frame = 3
Query:  198 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFFPWTETDFRPGEAPWW 704
            VPD+G+RQ MNLL  G ++      L P   +F PP  G  GGG TAKDA+GND+I + +L +H  GDRTL +GLKGDPTYLVV++DKTLA+YGINAVCTHLGCVVPWN++E KF+CPCHGSQYN +G+VVRGPAPLSLALAHANV +N KVVF  WTETDFR GE PWW
Sbjct:    9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQFLTSHNAGDRTLAQGLKGDPTYLVVQEDKTLANYGINAVCTHLGCVVPWNASEEKFMCPCHGSQYNAEGKVVRGPAPLSLALAHANVTDNDKVVFSTWTETDFRTGEEPWW 178          
The following BLAST results are available for this feature:
BLAST of EY666545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
UCRIA_PEA9.456e-9475.47Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_ARATH2.107e-9374.18Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_SPIOL1.365e-9275.47Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_FRIAG1.669e-9072.99Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIB_TOBAC2.410e-8973.49Cytochrome b6-f complex iron-sulfur subunit 2, chl... [more]
UCRIA_TOBAC4.546e-8872.56Cytochrome b6-f complex iron-sulfur subunit 1, chl... [more]
UCRIA_SOLTU1.323e-8772.09Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_ORYSJ1.120e-8673.21Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRIA_WHEAT3.371e-8370.39Cytochrome b6-f complex iron-sulfur subunit, chlor... [more]
UCRI_MICAN1.520e-6768.24Cytochrome b6-f complex iron-sulfur subunit OS=Mic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-016-B04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666545 ID=EY666545; Name=EY666545; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGTTCTCCACAATGGCTTCCTCCTCTTCTCTCTCCTCAGCA
ACTCCTTCTCAGCTATGCTCAAGCAAGGGTGGTATGTTCTGTCCATCAAG
AGCTTTTCTTGTGAAACCAGCAAGGACCCAGATGGTGACAAAGAATCCAA
TGGGAATGAAGATCAAGTGCCAGGCTACAAGTATTCCAGCTGATAGAGTG
CCTGATATGGGCAAGAGGCAGCTCATGAATTTGCTTCTCTTGGGTGCTGT
TTCTCTTCCCACTGGATTTATGTTGGTTCCTTATGCGACCTTCTTTGCCC
CACCTGGTTTAGGAAGTGCTGGTGGTGGTACTACTGCCAAGGATGCCATT
GGCAATGACATCATTGCCGCTGATTGGCTTAACACGCACGGCCCTGGGGA
CCGAACCCTCACCGAAGGATTGAAGGGAGATCCAACCTACCTTGTTGTGG
AAAAAGACAAAACACTTGCATCATATGGAATCAATGCTGTCTGCACTCAC
CTTGGATGTGTGGTGCCATGGAATTCAGCTGAGAACAAGTTCATCTGTCC
CTGCCACGGATCCCAATACAATAACCAAGGAAGAGTTGTGAGAGGGCCTG
CTCCATTGTCATTGGCATTGGCTCATGCCAACGTTGAAAATGGTAAGGTA
GTCTTCTTTCCATGGACGGAAACAGATTTCAGACCTGGTGAAGCTCCATG
GTGGGGCTTAAACTTGGTTCCGGGGCCTGTGCTTTCAATATTCAAGTTTT
GGCCGGTCGGATTGCTTTGCCGGTACTCCATAAACAACCGGAACCGGACA
TTGCTTATCTTAATGAAACTTTCCAAATGGAGAGGTCCTTCGCTTGAAAA
CGGGCATCATGCCAACGCTTGGACATCTTGACAAATTTTTCCTATAAGCA
TAATTATTGGGAGACTTTAAAG
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