CN185274

Overview
NameCN185274
Unique NameCN185274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2672 contig Csv1_Contig2672:132..882. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1 OS=Arabidopsis thaliana GN=APT1 PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 9.357e-75
Identity = 137/159 (86.16%), Postives = 151/159 (94.97%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            IPDFPKPGIMFQDITTLLLDT+AF+DTI LFV+RYKDK ISVVAG+EARGFIFGPPIALAIGAKFVPMRKPKKLPG+VISEEYSLEYG D +EMHVGAV+ GERA+I+DDL+ATGGTL+AAIRLLERVGV +VECACVIELPELKG+E+LGE  LFVLV
Sbjct:   81 IPDFPKPGIMFQDITTLLLDTEAFKDTIALFVDRYKDKGISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGKVISEEYSLEYGTDTIEMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVLV 239          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.157e-71
Identity = 131/159 (82.39%), Postives = 147/159 (92.45%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            IP+FPKPGI+FQDITTLLLD +AFRDT DLFVERYKDK+I+VVAG+EARGFIFGPPIALAIGAKFVP+RKPKKLPGEVISEEYSLEYG D +EMHVGAVQ  +R LIVDDL+ATGGTL AA +L+ERVG  VVECACVIELPELKGR++LG+ P+FVLV
Sbjct:   17 IPNFPKPGILFQDITTLLLDPQAFRDTTDLFVERYKDKDITVVAGVEARGFIFGPPIALAIGAKFVPIRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPNDRVLIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLV 175          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT2_ARATH (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.024e-61
Identity = 117/159 (73.58%), Postives = 135/159 (84.91%), Query Frame = -1
Query:  275 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 751
            IP FPK GIMFQDITTLLLD  AF+  +D+FV+RYK  NIS+VAG+EARGFIFGPPIALAIGAKFVP+RKP KLPG VISEEY LEYG+D +EM V AV++ ERALI+DDLVATGGTLSA+I LLER G  VVECACV+ LP+ KG+ +L  KPL+VLV
Sbjct:   24 IPHFPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKHMNISLVAGVEARGFIFGPPIALAIGAKFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVEAVKSEERALIIDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLV 182          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_LEPBL (Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=apt PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 88/161 (54.66%), Postives = 122/161 (75.78%), Query Frame = -1
Query:  278 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 751
            IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+DK I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  AVQ G++ L++DDL+ATGGT+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct:   11 IPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQDKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPAETVSEEYDLEYGKDVIEIHKDAVQPGDKILLMDDLIATGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_LEPBJ (Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=apt PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 88/161 (54.66%), Postives = 122/161 (75.78%), Query Frame = -1
Query:  278 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 751
            IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+DK I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  AVQ G++ L++DDL+ATGGT+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct:   11 IPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQDKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPAETVSEEYDLEYGKDVIEIHKDAVQPGDKILLMDDLIATGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_SHELP (Adenine phosphoribosyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=apt PE=3 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46
Identity = 87/158 (55.06%), Postives = 117/158 (74.05%), Query Frame = -1
Query:  278 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 751
            IPD+PKPGIMF+D+T+L+ D  A++ TI LFVERYKD  ++ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D++E+H  A++ G++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LPEL G  RL E  L ++
Sbjct:   16 IPDYPKPGIMFRDVTSLMEDPAAYQATIALFVERYKDLGVTKVVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDMLEIHTDAIKPGDKVLVVDDLLATGGTIEATVKLIRQLGGEVEHAAFVISLPELGGEHRLAEMGLSLM 173          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_LEPIN (Adenine phosphoribosyltransferase OS=Leptospira interrogans GN=apt PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.655e-45
Identity = 83/153 (54.25%), Postives = 118/153 (77.12%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+ K I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  ++Q G++ L++DDL+ATGGT+ AA++LL+++G  + E   +I+LP+L GR++L E+
Sbjct:   11 IPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQGKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIATGGTMIAAVKLLKKLGAEIYEAGVIIDLPDLGGRKKLQEE 163          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_LEPIC (Adenine phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=apt PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.655e-45
Identity = 83/153 (54.25%), Postives = 118/153 (77.12%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            IPD+PKPGI+F+DIT+LLLD +    TI  FV RY+ K I+ VAGIEARGF+ G P+A  +G  F+P+RK  KLP E +SEEY LEYGKDV+E+H  ++Q G++ L++DDL+ATGGT+ AA++LL+++G  + E   +I+LP+L GR++L E+
Sbjct:   11 IPDYPKPGILFRDITSLLLDPEGLALTIGTFVNRYQGKGITKVAGIEARGFLTGAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIATGGTMIAAVKLLKKLGAEIYEAGVIIDLPDLGGRKKLQEE 163          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_PSYIN (Adenine phosphoribosyltransferase OS=Psychromonas ingrahamii (strain 37) GN=apt PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.721e-44
Identity = 90/150 (60.00%), Postives = 112/150 (74.67%), Query Frame = -1
Query:  302 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 751
            IPD+P PGIMF+DIT+L+ +  AF  TI+L VERYKD+NIS V G EARGFIFG P+A AIGA FVP+RKP KLP   + E Y LEYG D + +H  A++  ER L+VDDL+ATGGT  A+I+L+ R G  V+E A VIELP LKG ++L
Sbjct:   16 IPDYPIPGIMFRDITSLIENGAAFSATINLLVERYKDQNISKVVGTEARGFIFGAPLAAAIGAGFVPVRKPGKLPRTTVHENYELEYGTDSLHIHSDAIKKNERVLLVDDLLATGGTAEASIKLIHRSGGIVIESAFVIELPALKGAQKL 165          
BLAST of CN185274 vs. ExPASy Swiss-Prot
Match: APT_ENTS8 (Adenine phosphoribosyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=apt PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.834e-44
Identity = 82/153 (53.59%), Postives = 117/153 (76.47%), Query Frame = -1
Query:  293 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 751
            I D+PKPGI+F+D+T+LL D KA+  +I+L VERYK+  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L ++ G ERL ++
Sbjct:   18 IQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDIGGEERLNKQ 170          
The following BLAST results are available for this feature:
BLAST of CN185274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT1_ARATH9.357e-7586.16Adenine phosphoribosyltransferase 1 OS=Arabidopsis... [more]
APT1_WHEAT2.157e-7182.39Adenine phosphoribosyltransferase 1 OS=Triticum ae... [more]
APT2_ARATH2.024e-6173.58Adenine phosphoribosyltransferase 2 OS=Arabidopsis... [more]
APT_LEPBL1.408e-4654.66Adenine phosphoribosyltransferase OS=Leptospira bo... [more]
APT_LEPBJ1.408e-4654.66Adenine phosphoribosyltransferase OS=Leptospira bo... [more]
APT_SHELP4.097e-4655.06Adenine phosphoribosyltransferase OS=Shewanella lo... [more]
APT_LEPIN2.655e-4554.25Adenine phosphoribosyltransferase OS=Leptospira in... [more]
APT_LEPIC2.655e-4554.25Adenine phosphoribosyltransferase OS=Leptospira in... [more]
APT_PSYIN1.721e-4460.00Adenine phosphoribosyltransferase OS=Psychromonas ... [more]
APT_ENTS83.834e-4453.59Adenine phosphoribosyltransferase OS=Enterobacter ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185274 ID=CN185274; Name=CN185274; organism=Citrus sinensis; type=EST; length=751bp
CCCCCCTCTGAAGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTT
TCATAAGCCTATCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTT
CCCCACCACTCTTTCCCCAACCTCTTAAATAAAATAAAAAGCCAATGAAA
CTGCTCTTATATTAATCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCA
GAGCCCGAGCGACTAGAAACCCATATGGTCCACAAACATTGCATTTAAAC
CATAAACTGAGATCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTC
CCAGCCGTTCCCGACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACAC
TCAACCACATGCACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAA
GGTCCCACCAGTTGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTG
CTTGTACAGCACCTACATGCATCTCCATTACATCTTTTCCATATTCCAAG
GAATACTCTTCGGAAATGACCTCCCCAGGAAGCTTCTTAGGTTTCCTCAT
AGGAACAAACTTTGCCCCAATAGCCAATGCAATAGGAGGCCCAAATATAA
AACCCCTAGCTTCAATACCTGCAACAACAGAGATGTTTTTGTCCTTGTAC
CTCTCAACGAACAGATCAATAGTATCTCTAAAAGCCTTGGTATCAAGAAG
CAATGTTGTGATATCTTGAAACATAATCCCTGGTTTAGGGAAGTCTGGGA
T
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