CN185270

Overview
NameCN185270
Unique NameCN185270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:88..563. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.539e-25
Identity = 58/107 (54.21%), Postives = 75/107 (70.09%), Query Frame = -1
Query:  156 VLFLSVVPLLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPS-TKKFEAVVWEKPWEHFKSLTSFKP 473
            +L   VV LL       A VGGW PI +  +  V+EIG+FAV+EYNK+S+S LKFE+V  GETQVVSGTNYRL +   DG   +K + A+VW+KPW  F++LTSF+P
Sbjct:    9 LLLSLVVVLLPLYASAAARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEP 115          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.059e-18
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -1
Query:  153 AAGDRKGALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKPM 443
            +  D  G L GG K +  +  +  + E+ +FAV E+N+++ + L FE + K +TQVV+GT Y L + VKDG   K +EA VWEKPWE+FK L  FKP+
Sbjct:   32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPV 129          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 5.301e-18
Identity = 40/91 (43.96%), Postives = 63/91 (69.23%), Query Frame = -1
Query:  153 GALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKPM 425
            G ++GG +P+ +  + H++++ +FAVTE+NK++ S L+FE +   + QVV+GT Y   + VK+G + K +EA VWEKPW  FK L  FKP+
Sbjct:   44 GPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPV 134          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 9.998e-17
Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = -1
Query:  156 LFLSVVPLLAA---GDR-KGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSFKP 470
            L L+V    AA   G+R  G LVGGW PI D  + H+ E+G +AV  +   S   L+F  V  GE QVVSG NYRL++   D   +T  + AVV+E+ W + + LTSFKP
Sbjct:   10 LLLAVSAAAAAQVGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKP 119          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.463e-15
Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = -1
Query:  153 LFLSVVPLLAA--GDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLTSFKPM 470
            L L ++PL++   G   G  +G  KPI++  +  V+ + ++A+ E+NK+SK  L F  V +G TQVVSGT Y L +  KD G   K +EAVV EK W H KSL SFK +
Sbjct:    9 LSLILLPLVSVVEGLGGGGGLGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 7.922e-14
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = -1
Query:  159 KGALVGGWKPIEDPKEKHVME-IGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFK 428
            K  ++GG   +   +    +E + +FA+ E+NKQ    L+F+ + K   QVV+GT Y L L  K+G  TK FEA VW KPW +FK L  FK
Sbjct:   31 KTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFK 121          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.010e-13
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -1
Query:  156 KGALVGGWK--PIEDPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKP 428
            +G L+GG +  P     +   +E+ +FAV E+N ++ + L+FE + K   QVV+G  +   + VK+G + K +EA VWEK WE+FK L  FKP
Sbjct:   13 RGVLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = -1
Query:  162 LLAAGDRKGALVGGWKPIEDPKEKHVMEIGQFAVTEYNKQSKS-ALKFESVEKGETQVVSGTNYRLILVVKDGPS--TKKFEAVVWEKPWEHFKSLTSF 449
            LLAA     AL  GW PI++  + H+ E+G++A+TE N+ S S  L F  V  GE QVVSG NYRL +    G    T  + AVV+E+ W + + L SF
Sbjct:    9 LLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISF 107          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.951e-12
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = -1
Query:  159 ALVGGWKPIEDPKEK-HVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFK 422
            A +GG + +   +    +  + +FAV E+NK+  + L+F  V   + QVVSGT Y + L  KDG   K +EA VWEKPW +FK L  FK
Sbjct:    2 AALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFK 90          
BLAST of CN185270 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.265e-11
Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = -1
Query:  156 ALVGGWKPIE-DPKEKHVMEIGQFAVTEYNKQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLTSFKP 422
            ALVGG   +  +     V  + +FAV E+NK+  + L+F  V K + QVV+GT + L L + +    K +EA VW KPW +FK L  FKP
Sbjct:   35 ALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKP 124          
The following BLAST results are available for this feature:
BLAST of CN185270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CYT5_ARATH1.539e-2554.21Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
CYT1_MAIZE4.059e-1844.90Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYT1_ORYSJ5.301e-1843.96Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT8_ORYSJ9.998e-1744.55Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more]
CYT4_ARATH2.463e-1544.04Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more]
CYT3_ARATH7.922e-1441.76Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_HORVU3.010e-1339.78Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT6_ORYSJ8.759e-1343.43Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more]
CYTI_VIGUN1.951e-1241.57Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH1.265e-1141.11Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185270 ID=CN185270; Name=CN185270; organism=Citrus sinensis; type=EST; length=476bp
GCCCCCCTCTTTTTTTTTTTTTTTTAATACTGAAAGACTCACCTTTGACA
TTCATAAACAATCCTTTAATATCATCACTCACATAACGAAAACCTTAATA
ATTATCAATCTGAGATTACATGCATTGTTATTTGTTAAACACCCTATTTA
ACCATAGGCTTAAACGAGGTGAGACTCTTGAAATGCTCCCATGGCTTCTC
CCAAACGACAGCTTCAAATTTCTTGGTCGAAGGTCCGTCCTTGACGACCA
AGATCAGCCGGTAATTGGTGCCGGAAACCACCTGAGTCTCGCCCTTCTCC
ACGCTCTCGAACTTCAACGCGCTCTTTGACTGTTTGTTGTACTCCGTCAC
CGCGAACTGTCCGATCTCCATCACGTGCTTCTCCTTGGGGTCCTCTATCG
GCTTCCATCCCCCAACCAACGCTCCTTTACGGTCGCCGGCGGCCAGGAGA
GGGACCACGGAGAGAAAGAGAACCCT
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