CN185260

Overview
NameCN185260
Unique NameCN185260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2471 contig Csv1_Contig2471:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_BOVIN (Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.438e-43
Identity = 93/190 (48.95%), Postives = 120/190 (63.16%), Query Frame = 2
Query:  134 MAAEKWVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            MA+EK +++VT   P NIAV+KYWGKRDE LILP+N S+SVTL  D L TTTT A+S  F +DR+WLNG+E  +G  R Q CL+EIR  A                  K  +H+AS NNFPT            CL ++LA++  +    S LS +AR+GSGSACRSL+GGFV+W MG+  +G DS+A Q
Sbjct:    1 MASEKPIVVVTCTAPVNIAVVKYWGKRDEELILPINSSLSVTLHQDQLKTTTTAAISRDFTEDRIWLNGREEDMGHPRLQACLREIRRLARKRRSDGHEDPLPLSLSYK--VHVASENNFPTAAGLASSAAGYACLAYTLARVYGV---DSDLSEVARRGSGSACRSLYGGFVEWQMGERPDGKDSVACQ 185          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_MOUSE (Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42
Identity = 96/191 (50.26%), Postives = 121/191 (63.35%), Query Frame = 2
Query:  134 MAAEK-WVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            MA+EK   LMVT   P NIAVIKYWGKRDE LILP+N S+SVTL  D L TTTTVA+S  F +DR+WLNG+E  +G  R Q CL+EIR  A                  K  +H+AS NNFPT            CL ++LA++  +   +  LS +AR+GSGSACRSL+GGFV+W MG++ +G DS+A Q
Sbjct:    1 MASEKPQDLMVTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLSLSYK--VHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV---EGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ 186          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_RAT (Diphosphomevalonate decarboxylase OS=Rattus norvegicus GN=Mvd PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.455e-42
Identity = 95/191 (49.74%), Postives = 120/191 (62.83%), Query Frame = 2
Query:  134 MAAEK-WVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            MA+EK   LMVT   P NIAVIKYWGKRDE LILP+N S+SVTL  D L TTTT A+S  F +DR+WLNG+E  +G  R Q CL+EIR  A                  K  +H+AS NNFPT            CL ++LA++  +   +  LS +AR+GSGSACRSL+GGFV+W MG++ +G DS+A Q
Sbjct:    1 MASEKPQDLMVTCTAPVNIAVIKYWGKRDEALILPINPSLSVTLHQDQLKTTTTAAISKDFTEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTGDGDALPLSLGYK--VHVASVNNFPTAAGLASSAAGYACLAYTLARVYGV---EGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ 186          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_HUMAN (Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.206e-42
Identity = 92/190 (48.42%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  134 MAAEKWVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            MA+EK +  VT   P NIAVIKYWGKRDE L+LP+N S+SVTL  D L TTTT  +S  F +DR+WLNG+E  +G  R Q CL+EIR  A                  K  +H+AS NNFPT            CL ++LA++  +   +S LS +AR+GSGSACRSL+GGFV+W MG++ +G DS+A Q
Sbjct:    1 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCK--VHVASVNNFPTAAGLASSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ 185          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_DANRE (Diphosphomevalonate decarboxylase OS=Danio rerio GN=mvd PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.143e-42
Identity = 93/182 (51.10%), Postives = 115/182 (63.19%), Query Frame = 2
Query:  158 MVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            MVT   P NIAVIKYWGKRDE LILPVN S+SVTL  DHL TTTT+A S SF +D +WLNGKE  +   R Q+CL EIR  A                     +HI S NNFPT            CLV++L++L N+   + +LS +ARQGSGSACRSL+GGFV+W +G++ +G DS+A Q
Sbjct:   11 MVTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLHQDHLRTTTTIACSRSFHKDCIWLNGKEQDISHPRLQSCLLEIRRLA-----QRRKNTGDPASDVSNKVHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV---EGELSGVARQGSGSACRSLYGGFVQWKLGEQSDGKDSIAEQ 184          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_DICDI (Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum GN=mvd PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40
Identity = 90/181 (49.72%), Postives = 113/181 (62.43%), Query Frame = 2
Query:  161 VTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            VT   P NIAVIKYWGKRDE +ILP+N S+S TL  D L TTTT+  S  + +D ++LNGK+  +   RYQN LK IRSRA  +              +K  +HIAS NNFPT            CLVF+LA++  +      +S IAR GSGSACRS++GGFVKW MG + +GSDS+AVQ
Sbjct:    6 VTCTAPVNIAVIKYWGKRDENIILPLNSSLSGTLHQDDLKTTTTIVASEDYTEDELYLNGKKEDINAVRYQNVLKMIRSRATKLMD------------KKHCVHIASINNFPTAAGLASSASGYCCLVFTLAQMYGV---DGDISGIARLGSGSACRSMYGGFVKWEMGTKDDGSDSIAVQ 171          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_YEAST (Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae GN=ERG19 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.791e-38
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 2
Query:  152 VLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            V   +   P NIA +KYWGKRD  L LP N SISVTL  D L T T+ A +P F++D +WLNG+  S+   R QNCL+++R    ++             W+   LHI S NNFPT             LV ++AKL  L ++ S++S IAR+GSGSACRSLFGG+V W MGK  +G DS+AVQ
Sbjct:    3 VYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFERDTLWLNGEPHSIDNERTQNCLRDLRQLRKEM-ESKDASLPTLSQWK---LHIVSENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRSLFGGYVAWEMGKAEDGHDSMAVQ 182          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_DEBHA (Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii GN=ERG19 PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.173e-38
Identity = 85/180 (47.22%), Postives = 110/180 (61.11%), Query Frame = 2
Query:  164 TAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            +A  P NIA +KYWGKRD++L LP N SISVTL  + L T T+VA S  F +D++WLNGK  SL   R + CL ++R+   ++               +  +HI S NNFPT             LV S+AKL  L +N S++S IAR+GSGSACRSLFGG+V W MG+E NG DS AV+
Sbjct:    7 SATAPVNIATLKYWGKRDKSLNLPTNSSISVTLSQNDLRTLTSVAASEDFKEDKLWLNGKLESLESERTKACLADLRTLRKELESNDSSIPKL----SQFGVHIVSENNFPTAAGLASSAAGFAALVVSIAKLYELPQNMSEISKIARKGSGSACRSLFGGYVAWEMGQETNGEDSKAVE 182          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_SCHPO (Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe GN=erg19 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.958e-35
Identity = 85/188 (45.21%), Postives = 105/188 (55.85%), Query Frame = 2
Query:  143 EKWVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGK-EISLGGGRYQNCLKEIRSRACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            +K V   T   P NIAVIKYWGKRD  L LP N SISVTL  D L T TT + S  F+ D +WLNG  E      R + C++E+R    D+                L LH+ S NNFPT                ++A+L +L    +QLS IARQGSGSACRSLFGG+V W MG+  +G+DS+AVQ
Sbjct:    2 DKKVYQCTVSAPVNIAVIKYWGKRDVALNLPTNSSISVTLSQDDLRTVTTASCSEKFENDTLWLNGNAEEIFANKRLRVCVEELRKARLDLEEENDDLDKIG----ALKLHVVSENNFPTAAGLASSAAGYAAFCEAIARLYDLPWTPTQLSRIARQGSGSACRSLFGGYVAWEMGELHSGADSVAVQ 185          
BLAST of CN185260 vs. ExPASy Swiss-Prot
Match: ERG19_ASHGO (Diphosphomevalonate decarboxylase OS=Ashbya gossypii GN=ERG19 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 76/162 (46.91%), Postives = 95/162 (58.64%), Query Frame = 2
Query:  224 LILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRS--RACDVXXXXXXXXXXXXXWQKLHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQ 703
            L LP N SISVTL  + L T T+ A  P   +DR+WLNGK  SLG  R Q CL ++R+  RA +              W+   LHI S NNFPT             LV ++AKL  L ++ S++S IAR+GSGSACRSL+GG+V W MG E +GSDS AVQ
Sbjct:    2 LNLPTNSSISVTLSQEDLRTLTSAATGPELAEDRLWLNGKPESLGNARTQQCLADLRALRRALETEEPDLPRMSE---WK---LHIVSENNFPTAAGLASSAAGFAALVVAVAKLYGLPQDYSEISKIARKGSGSACRSLYGGYVAWEMGAEADGSDSRAVQ 157          
The following BLAST results are available for this feature:
BLAST of CN185260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ERG19_BOVIN8.438e-4348.95Diphosphomevalonate decarboxylase OS=Bos taurus GN... [more]
ERG19_MOUSE1.102e-4250.26Diphosphomevalonate decarboxylase OS=Mus musculus ... [more]
ERG19_RAT2.455e-4249.74Diphosphomevalonate decarboxylase OS=Rattus norveg... [more]
ERG19_HUMAN3.206e-4248.42Diphosphomevalonate decarboxylase OS=Homo sapiens ... [more]
ERG19_DANRE7.143e-4251.10Diphosphomevalonate decarboxylase OS=Danio rerio G... [more]
ERG19_DICDI1.759e-4049.72Diphosphomevalonate decarboxylase OS=Dictyostelium... [more]
ERG19_YEAST4.791e-3846.20Diphosphomevalonate decarboxylase OS=Saccharomyces... [more]
ERG19_DEBHA8.173e-3847.22Diphosphomevalonate decarboxylase OS=Debaryomyces ... [more]
ERG19_SCHPO4.958e-3545.21Diphosphomevalonate decarboxylase OS=Schizosacchar... [more]
ERG19_ASHGO4.803e-3046.91Diphosphomevalonate decarboxylase OS=Ashbya gossyp... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185260 ID=CN185260; Name=CN185260; organism=Citrus sinensis; type=EST; length=703bp
GAGGCGCACTTGCGTTTCTGTTAACTACATTCTCACTTCGGATTCGGAAT
CGAAACGAAACGTTTTTTTTCCTTTTCCTTTAGAGTGAGGAGGAGCCTGT
TTCGTTAACGTTTTAGAATTTTTTTTCATAACGATGGCGGCGGAGAAATG
GGTACTGATGGTGACGGCGCAGACGCCGACGAACATAGCTGTGATAAAGT
ACTGGGGGAAGCGAGACGAAACCCTAATTTTGCCTGTCAATGATAGCATC
AGCGTCACCCTTGATCCCGATCACCTCTGTACTACCACGACCGTTGCCGT
CAGTCCTAGCTTTGACCAAGATCGTATGTGGCTCAATGGCAAAGAAATTT
CTCTTGGAGGGGGAAGGTACCAGAATTGTTTGAAGGAAATTCGGAGTCGT
GCTTGTGATGTTGAGGACAAGGAGAAAGGGATCAAGATTGAGAAGAAGGA
CTGGCAGAAATTGCATTTACACATTGCTTCGTTTAACAATTTTCCGACGG
CCGCTGGATTGGCTTCCTCTGCTGCTGGTTTTGCCTGCCTTGTTTTTTCA
CTGGCTAAGCTGATGAATTTGAAAGAAAATCAGAGCCAGCTTTCTGCTAT
AGCTAGGCAAGGTTCAGGCAGTGCTTGTCGTAGTCTGTTTGGTGGATTTG
TCAAGTGGATAATGGGAAAAGAAGGAAATGGAAGTGACAGCCTTGCAGTT
CAA
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