CN185255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185255 vs. ExPASy Swiss-Prot
Match: FMT_BACLD (Methionyl-tRNA formyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=fmt PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 4.318e-14 Identity = 33/100 (33.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 9 DGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNK 308 +G ++TGV++ + V LDAG ++A+ ++++++ L L G+ LL +P I+DGS V + QD+ KAT AP I E+ + + + VL+N+ Sbjct: 127 EGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLSETVPRIIDGS--VTPEKQDEQKATYAPNIKREQELIDWSKPGEVLYNQ 224 HSP 2 Score: 36.1946 bits (82), Expect = 4.318e-14 Identity = 25/64 (39.06%), Postives = 34/64 (53.12%), Query Frame = 2 Query: 353 NGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAF 541 NGQ LK+ + C ++ E I T +KD +VV G TAL++ EVQ GKK + A F Sbjct: 239 NGQT----LKVWAAKKCQALKQAEPGEIVTVEKDGIVVATGNDTALKLTEVQPAGKKRMKAEDF 298
BLAST of CN185255 vs. ExPASy Swiss-Prot
Match: FMT_LACAC (Methionyl-tRNA formyltransferase OS=Lactobacillus acidophilus GN=fmt PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.288e-14 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 9 DGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHN 305 +G KETG+++ V+ +DAG + A+E ++++ + A L L G +LL++ LPSI+DGS VK PQD K +P IT E+ LS D A +N Sbjct: 127 NGDKETGITIMEMVKKMDAGDIYAQEAIKIEPEDNAGTLFSKLSILGRDLLLKTLPSIIDGS--VKKTPQDPDKVVFSPNITKEQERLSIDMTAEQANN 223 HSP 2 Score: 27.335 bits (59), Expect = 7.288e-14 Identity = 18/65 (27.69%), Postives = 28/65 (43.08%), Query Frame = 2 Query: 353 NGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAFWN 547 NGQ+ K+ V + + E + K + + T L +LEVQ GKK ++ F N Sbjct: 239 NGQR----FKVWEAEVASDSSSLEAGTVVANKGRFAISFADNTVLNLLEVQPSGKKRMNIKNFLN 299
BLAST of CN185255 vs. ExPASy Swiss-Prot
Match: FMT_SYNWW (Methionyl-tRNA formyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=fmt PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.764e-11 Identity = 33/100 (33.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 9 DGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNK 308 DG K +G+++ F LD G +I +E + VDD I EL +L G++LL++ + ++ G ++ QDDS+A+ A +I+ E+ +++ E A +HN+ Sbjct: 126 DGIKSSGITIMFMDEGLDTGDIIMQEAIAVDDNINHGELEKILADMGADLLLQVVDRLVQGE-KLPRVVQDDSQASYAARISKEDEIINWSEPAYAIHNR 224 HSP 2 Score: 24.6386 bits (52), Expect = 1.764e-11 Identity = 18/40 (45.00%), Postives = 22/40 (55.00%), Query Frame = 2 Query: 422 EVDGITFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAF 541 EVD TF+ V GE LEVLE+Q GKK + + F Sbjct: 264 EVDKNTFQ-----VQTGE-GILEVLEIQKAGKKRMPTSEF 297
BLAST of CN185255 vs. ExPASy Swiss-Prot
Match: FMT_STACT (Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain TM300) GN=fmt PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.291e-11 Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 9 DGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHN 305 DG KETGV++ + LDAG +I+++ +E++ + L G++LL + LP I++G+ A QDD KAT A I+ E+ + + + A ++N Sbjct: 126 DGEKETGVTIMYMAPKLDAGDIISQQAIEIEANDNVESMHDKLSFLGADLLKKTLPEIINGTNDRIA--QDDDKATFASNISREDERIDWTQSAEQVYN 222 HSP 2 Score: 31.5722 bits (70), Expect = 2.291e-11 Identity = 22/77 (28.57%), Postives = 35/77 (45.45%), Query Frame = 2 Query: 311 WPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAF 541 WP K+ DD N +K+ R+ + N + + K A++V G A+ + E+QL GKK + A F Sbjct: 230 WPVAYTKL---DDTN-------MKLYAARIEEGKKGNPGEILETTKKAIIVGTGSDDAIALTEIQLSGKKRMPTANF 296
BLAST of CN185255 vs. ExPASy Swiss-Prot
Match: FMT_KOSOT (Methionyl-tRNA formyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=fmt PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 5.010e-11 Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 9 DGAKETGVSLAFSVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWL 272 +G KETG+++ +D+GP+ +E++E+ L L + G +LLI L I G +K PQD S+AT APKIT E++ L Sbjct: 126 NGEKETGITIFKIDEGMDSGPIALQERIEISSDDNFGTLKKKLCNLGKKLLIEFLKKISAG--EIKLTPQDHSQATYAPKITKEDTIL 211 HSP 2 Score: 31.9574 bits (71), Expect = 5.010e-11 Identity = 16/55 (29.09%), Postives = 32/55 (58.18%), Query Frame = 2 Query: 371 VELKIITTRVCPNIQTNEVDG--ITFKKDALVVPCGECTALEVLEVQLPGKKAVS 529 + +K+ +C N + G I+ KD++VV C + A+++ ++Q PGKK ++ Sbjct: 240 LRVKLFGAGICDNCCVDAEPGQIISISKDSMVVACKK-GAVKISKIQFPGKKVIT 293 The following BLAST results are available for this feature:
BLAST of CN185255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185255 ID=CN185255; Name=CN185255; organism=Citrus sinensis; type=EST; length=701bpback to top |