CN185160

Overview
NameCN185160
Unique NameCN185160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2330 contig Csv1_Contig2330:598..1436. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.380e-56
Identity = 111/156 (71.15%), Postives = 124/156 (79.49%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K GKAFGLKVTVISTSP KE+EAI KLGAD+FLVS DP K+KAAMGTMDYIIDT+SA HSL P               LP KPLE+ +F LV  R+L+GGSNIGGMKETQEMLDFC KHNI ADIEL++M +INTA+ERL K+DVKYRFVIDV NS
Sbjct:  200 KFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANS 355          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.244e-56
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K GKAFGLKVTVIS+SP KESEAI  LGAD+FL+SSDP K+KAA GTMDYIIDT+SAVHSL                 LP KPL++PIF LV  R+L+GGSN GG+KETQEMLDFC KHNIAA+IEL++MD+INTAIERL+K+DVKYRFVIDV NS
Sbjct:  193 KFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANS 348          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 4.439e-55
Identity = 108/156 (69.23%), Postives = 129/156 (82.69%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K+GKAFGLKVTVIS+S  K  EAI+ LGAD+FLV++DP K+KAA+GTMDYIIDT+SAVH+L P               LPEKPLE+P+F LV  R++VGGS++GGMKETQEMLDFCAKHNI ADIEL++MD+INTA+ERLAKSDV+YRFVIDV NS
Sbjct:  201 KIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANS 356          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.521e-50
Identity = 101/158 (63.92%), Postives = 125/158 (79.11%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+GKAFGL+VTVIS S +KE EAI +LGAD+FLV++D  K+K A+GTMD+IIDTVSA H+L P               LPEKPL++PIF+LV  R++VGGS IGGMKETQEML+FCAKH I +DIEL++M  IN+A++RLAKSDV+YRFVIDV NS L
Sbjct:  197 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSLL 354          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.806e-48
Identity = 99/158 (62.66%), Postives = 122/158 (77.22%), Query Frame = -3
Query:  316 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNSKL 789
            K+GKAFGL+VTVIS S +KE EAI +LGAD+FLV++D  K+K A+GTMD+IIDTVSA H+L P               L EKPL++PIF LV  R++VGGS IGGMKETQEML+FCAKH I +DIEL++M  IN+A++RL KSDV+YRFVIDV NS L
Sbjct:  196 KIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSLL 353          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.407e-47
Identity = 94/156 (60.26%), Postives = 117/156 (75.00%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  KA G+KVTVISTSPKKE EA+  LGAD+FLVS D  +++AA+GTMD IIDTVSA H L P                PEKPLE+P+F L+  R++V GS IGGMKETQEM+DF A+HNI ADIE++ +D +NTA+ERL K+DV+YRFVID+GN+
Sbjct:  199 KFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNT 354          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.208e-46
Identity = 91/156 (58.33%), Postives = 119/156 (76.28%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K GKAFG KVTVISTSP K+ EA+++LGAD+F+VS +P ++++AMGT+D IIDTVSA H L P               +P+KPLE+P+F L+  R+++ GS IGGMKETQEM+DF AKH+I +DIE+V MD +NTA+ERL K DV+YRFVIDV N+
Sbjct:  202 KFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANT 357          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.919e-46
Identity = 95/156 (60.90%), Postives = 112/156 (71.79%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  KA G KVTVISTS KK  EAI++LGADAFLVS DP ++K AMGTMD IIDTVSA HSL P                PEKPLE+P+  L+  R++V GS IGG+KETQEM+D   KHNI ADIEL+  D +NTA+ERL K+DV+YRFVIDV N+
Sbjct:  197 KFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANT 352          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.165e-45
Identity = 91/156 (58.33%), Postives = 115/156 (73.72%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            KM KAFG  VTVISTS  K+ EA+ KLGAD FLVSSD  +++AA GT+  IIDTVSA+H + P                PEKPLE+P+F L+  R+++ GSNIGG+KETQEMLDF A+HNI AD+E++ +D +NTA+ERL KSDV+YRFVIDV N+
Sbjct:  178 KMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANT 333          
BLAST of CN185160 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.165e-45
Identity = 92/156 (58.97%), Postives = 112/156 (71.79%), Query Frame = -3
Query:  322 KMGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXLPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVKYRFVIDVGNS 789
            K  KA G KVTVISTS +K  EA+++LGADAFLVS DP ++K AMGTMD IIDTVSA H L P                P +PLE+P+F L+  R++V GS +GG+KETQEM+D   KHNI ADIEL+  D +NTA+ERLAK+DVKYRFVIDV N+
Sbjct:  197 KFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANT 352          
The following BLAST results are available for this feature:
BLAST of CN185160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
MTDH_MEDSA1.380e-5671.15Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH1_STYHU5.244e-5670.51Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH9_ARATH4.439e-5569.23Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH2_ARATH2.521e-5063.92Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH3_ARATH1.806e-4862.66Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
MTDH_FRAAN3.407e-4760.26Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR2.208e-4658.33Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH8_ARATH4.919e-4660.90Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_PETCR4.165e-4558.33Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH4.165e-4558.97Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006N21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185160 ID=CN185160; Name=CN185160; organism=Citrus sinensis; type=EST; length=839bp
GAGGTGCTCACATTTTCCTCCAATATAAGACATTAGTATTTTGAAATACT
ATCCCAACAAAATATAAGTTAGCTAGATACTTTGAATGCAAAAAGGTGTA
GATAAATTGTGATGCCATATATAACCATTAAACAAGAAGATAACAATAGT
AGCAAGAACACGGACCAAATATATCCACACCCAGGGGTGGGGTGGGGATT
GTGTCCTGTCACTCCATCAAACACACATGGTAAGCAGGAAACTTGAGCTT
ATTCTAGCATCCAGGCTCAAAGTAAATGAGCATACAGCGGCGCGCACATC
ACAATGTACCTACTGCAATTTGGAGTTCCCCACGTCAATAACAAAACGGT
ACTTGACATCAGACTTTGCAAGCCTTTCTATGGCTGTGTTAATTTGGTCC
ATCCGGACCAGTTCAATGTCTGCAGCAATGTTGTGCTTGGCGCAAAAGTC
CAACATCTCTTGTGTCTCCTTCATTCCTCCAATGTTGCTTCCTCCAACAA
GCCTCCGAGCCCCAACTAAAGCAAAAATAGGCACCTCTAGGGGCTTCTCA
GGCAAGCCCACGGTGACCAGCTTTCCATTCACTTTCAGCAGACCAAGTAG
TGGTGCAAGGGAATGAACCGCTGACACAGTGTCAATAATGTAATCCATAG
TGCCCATAGCAGCCTTAACTTTAGCAGGATCACTGGAAACAAGGAATGCA
TCAGCACCAAGTTTGCTGATCGCTTCACTCTCTTTTTTCGGAGAAGTACT
GATGACGGTGACTTTCAACCCAAAGGCCTTGCCCATTTTCACAGCAACAT
GGCCAAGCCCACCAAGTCCTGCTACACCCAAATGCTTAC
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