EY666521

Overview
NameEY666521
Unique NameEY666521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666521 vs. ExPASy Swiss-Prot
Match: STOP1_ARATH (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.121e-37
Identity = 103/243 (42.39%), Postives = 127/243 (52.26%), Query Frame = 2 
Query:  101 MDLKEGLRAETWAKSSLAENEMSKRISSNNPCFTDFNSQQYQQKWEDPSILDYDIRINPAFQEFNQPPQNQSSLPCDPTNQIKNPFQMNEN-LQTNKMQDWDPKAMLNNLSFLEQKIHELQDLVHLIVGRRSQILGRPDELVAQQQQLITADLTSIIVQLISTAGSLLPSMKHTLSAAT-PSMGQLGQFGGVPFSPGAGLSDSVQVQNRCAKKVSNQSTPLV*SGNMGTPPKPAGEKHEFKKE 823
            M+ ++ L    W  SS    E        N  F  F SQQ   KWED SILDY++ + P  QE                       Q N + LQ  + Q WDP+ ML+NLSF+EQKIH+LQDLVHL+VGR  Q+ GR DEL AQQQQLIT DLTSII+QLISTAGSLLPS+KH +S A  P  GQ G            ++   Q  N C  +  +   P++     G       E+HE K E
Sbjct:    1 METEDDLCNTNWGSSSSKSREPGSS-DCGNSTFAGFTSQQ---KWEDASILDYEMGVEPGLQE---------------------SIQANVDFLQGVRAQAWDPRTMLSNLSFMEQKIHQLQDLVHLLVGRGGQLQGRQDELAAQQQQLITTDLTSIIIQLISTAGSLLPSVKHNMSTAPGPFTGQPGSAVFPYVREANNVASQSQNNNNCGAREFDLPKPVLVDEREG----HVVEEHEMKDE 214
The following BLAST results are available for this feature:
BLAST of EY666521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
STOP1_ARATH1.121e-3742.39Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666521 ID=EY666521; Name=EY666521; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGGTTAAGTTGAATAGCAAACACAGCATCTAAGCTAAGTTG
AATCTGATTGATTGGGATTTGGATCTGGTACCTGAGAAAAGGATTTTGAA
ATGGATCTTAAAGAGGGACTGCGTGCAGAGACTTGGGCGAAGTCTTCTTT
GGCTGAAAATGAGATGTCAAAAAGGATTTCGTCTAATAACCCATGTTTTA
CCGATTTCAATTCACAGCAATACCAGCAGAAGTGGGAAGATCCCTCCATC
TTAGATTATGACATTAGGATCAATCCAGCATTTCAAGAATTCAATCAACC
TCCTCAAAACCAATCCTCACTCCCTTGTGACCCCACTAACCAAATTAAAA
ATCCATTCCAGATGAATGAGAATCTCCAAACCAACAAAATGCAAGATTGG
GATCCAAAAGCAATGCTAAATAATCTTTCATTTTTGGAACAAAAGATCCA
TGAGCTTCAGGATTTGGTCCACTTAATTGTGGGCCGGAGGAGCCAAATTT
TGGGTCGACCAGATGAACTTGTAGCTCAGCAGCAGCAGCTCATTACTGCA
GATCTCACTTCAATTATTGTTCAGTTAATCTCCACAGCTGGTAGTCTTCT
CCCATCCATGAAGCATACCCTCTCTGCAGCTACTCCTTCCATGGGACAGC
TTGGGCAATTTGGCGGGGTCCCTTTTTCTCCAGGGGCTGGCTTAAGTGAT
AGCGTTCAGGTGCAAAATAGGTGTGCAAAAAAAGTGTCTAATCAATCAAC
CCCATTGGTCTAATCCGGAAATATGGGGACTCCACCAAAACCTGCTGGTG
AAAAACATGAATTTAAAAAAGAAAAATGATGGCTGAAGGATGGGAAAACA
ACTTT
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