CN185154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185154 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = -1 Query: 338 IGCVIEVIYLMLYLIYAPQKQKSF-TIKLILVFNVGAFALMMVIVNFFVKGPN-RVTAVGCVCAVYNVAVFSAPLSIMRRVIKTKSVEYMPFSLSFFLTLCATMWFFYGLFVK-DMVIALPNVLGFLFGIAQMILYLVYKGKKGNESNQKQQE 787 +G VIE+ Y+ +YL+Y K+ I L V +++I F +KG + T VG +C V+N+A++ AP + +V+KTKSVEYMPF LS + A +W Y L K D + N +G ++Q+I+Y +Y E K E Sbjct: 78 VGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSLIFKIDYYVLASNGIGTFLALSQLIVYFMYYKSTPKEKTVKPSE 230
BLAST of CN185154 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14 Identity = 38/140 (27.14%), Postives = 80/140 (57.14%), Query Frame = -1 Query: 380 IGCVIEVIYLMLYLIYAPQKQ----KSFTIKLILVFNVGAFALMMVIVNFFVKGPNRVTAVGCVCAVYNVAVFSAPLSIMRRVIKTKSVEYMPFSLSFFLTLCATMWFFYGLFVKDMVIALPNVLGFLFGIAQMILYLVY 787 +G V++ +Y++ YL Y+PQK ++ T+ +L+ G F L++ + R+ +G C+V+ ++++ +PL+ + ++++TKS + + FSL+ C+ W YG ++D I +PN+ G L + ++ L+ Y Sbjct: 75 VGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVPDLEA------RLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYGFRLRDPYITVPNLPGILTSLIRLGLFCKY 208
BLAST of CN185154 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEBR (RAG1-activating protein 1 homolog OS=Caenorhabditis briggsae GN=CBG13500 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12 Identity = 44/148 (29.73%), Postives = 78/148 (52.70%), Query Frame = -1 Query: 344 IGCVIEVIYLMLYLIYAPQKQKSFTIKLILVFNVGAFALMMVIVNFFVKGPNRVTAVGCVCAVYNVAVFSAPLSIMRRVIKTKSVEYMPFSLSFFLTLCATMWFFYGLFVKDMVIALPNVLGFLFGIAQMILYLVYKGKKGNESNQKQ 787 +G +Y + +LIY+ K K+FT +LILV M+V + F PN + +G +C +N+ F APL+ + V++ + V +P + L ++ W YG V+D+ I +PN +G I Q+ L++V ++ +S +Q Sbjct: 73 VGVFCMAVYCIFFLIYSLPK-KTFTCQLILV--TSTITGMVVWIAF---KPN-LDYLGIICMTFNIMNFGAPLAGLGVVLRNREVSTLPLPMCVANFLVSSQWCLYGNLVQDIYIIIPNGIGMFLAIVQLSLFIVLPRRENEKSPLEQ 213
BLAST of CN185154 vs. ExPASy Swiss-Prot
Match: R1AP1_DROPS (RAG1-activating protein 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=slv PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 40/137 (29.20%), Postives = 70/137 (51.09%), Query Frame = -1 Query: 380 IGCVIEVIYLMLYLIYAPQKQKSFTIKLILVFNVGAFALMMVIVNFFVKGPNRVTAV-GCVCAVYNVAVFSAPLSIMRRVIKTKSVEYMPFSLSFFLTLCATMWFFYGLFVKDMVIALPNVLGFLFGIAQMILYLVY 787 IG + +IY ++Y ++ K ++F + V V A+++V N + + + G C + V F+APL+ + VI+ K+ E +P L L + W YG+ + D I +PN LG L + Q+ L++VY Sbjct: 73 IGSTLFLIYTLIYYVFTVNK-RAFVRQFAFVLAV-LIAVVVVYTNRLADQRDEMIRITGIFCCIVTVCFFAAPLATLLHVIRAKNSESLPLPLIATSFLVSLQWLIYGILISDSFIQIPNFLGCLLSMLQLSLFVVY 207
BLAST of CN185154 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEEL (RAG1-activating protein 1 homolog OS=Caenorhabditis elegans GN=K02D7.5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12 Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = -1 Query: 356 IGCVIEVIYLMLYLIYAPQKQKSFTIKLILVFN-VGAFALMMVIVNFFVKGPNRVTAVGCVCAVYNVAVFSAPLSIMRRVIKTKSVEYMPFSLSFFLTLCATMWFFYGLFVKDMVIALPNVLGFLFGIAQMILYLVYKGKKGNES 787 +G Y + +LIY+ K K+FT +LILV + +G L + + PN + +G +C +N+ F APL+ + V+K + V +P + L ++ W YG V D+ I +PN +G I Q+ L++V ++ +S Sbjct: 73 VGVACMAFYCVFFLIYSLPK-KTFTCQLILVTSTIGGMVLWIALK------PN-LDYLGVICMTFNIMNFGAPLAGLGVVLKNREVSTLPLPMCVANFLVSSQWCLYGNLVSDIYIIIPNGIGMFLAIVQLALFVVLPIRENEKS 209
BLAST of CN185154 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.583e-11 Identity = 35/134 (26.12%), Postives = 72/134 (53.73%), Query Frame = -1 Query: 389 IGCVIEVIYLMLYLIYAPQKQKSFTIKLILVFNVGAFALMMVIVNFFVK-GPNRVTAVGCVCAVYNVAVFSAPLSIMRRVIKTKSVEYMPFSLSFFLTLCATMWFFYGLFVKDMVIALPNVLGFLFGIAQMILY 787 IG ++ +Y+ Y Y +K++ +T L++V + V + + G +++ +G C+V+ ++++ +PL+ + +++TKSVE + FSL+ +T W YGL + D I +PN G + + L+ Sbjct: 71 IGAFLQTVYIATYCHYTKEKRRVYTQTLLMV---SVLCVAWVYFSLVISPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGLQLGDYYIMVPNTPGIFTSLIRFFLF 201 The following BLAST results are available for this feature:
BLAST of CN185154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185154 ID=CN185154; Name=CN185154; organism=Citrus sinensis; type=EST; length=787bpback to top |