CN185137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185137 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 106 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGG 318 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS RTV IGG Sbjct: 234 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGG 304
BLAST of CN185137 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 106 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGG 318 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS RTV IGG Sbjct: 234 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGG 304
BLAST of CN185137 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.929e-20 Identity = 45/71 (63.38%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 106 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGG 318 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A KIS RTV IGG Sbjct: 235 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGG 305
BLAST of CN185137 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.215e-19 Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 109 IFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGG 318 I +ESF LTF+AEWGDR+QIATIALA NA GV+ GA +GHTIC +AV+GG +A +IS++TV IGG Sbjct: 121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGG 190
BLAST of CN185137 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16 Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 106 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTVATIGG 318 P+F+++F LTF++EWGDRSQIATIA+A N GV +GA +GH CT+LAV+ G +++KI V IGG Sbjct: 201 PLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGG 271
BLAST of CN185137 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 106 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKISQRTV 303 P++++ F++ FL E GDRSQI+ IA+AT + V GA IGH IC+ LAVVGG +LA++IS RT+ Sbjct: 191 PVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTI 256 The following BLAST results are available for this feature:
BLAST of CN185137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185137 ID=CN185137; Name=CN185137; organism=Citrus sinensis; type=EST; length=502bpback to top |