EY666517

Overview
NameEY666517
Unique NameEY666517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 2.061e-57
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS
Sbjct:    1 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 103          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 8.104e-54
Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGTS
Sbjct:    1 MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTS 103          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 5.265e-45
Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +KRCKHFE+GGDKK KG +
Sbjct:    1 MVNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAA 103          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_CRYNE (60S ribosomal protein L44 OS=Cryptococcus neoformans GN=RPL44 PE=3 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 8.981e-45
Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +KRCKHFE+GGDKK +G +
Sbjct:    1 MVNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAA 103          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 3.413e-44
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVN+PKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +KRCKHFE+GG+KK KG +
Sbjct:    1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAA 103          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 3.413e-44
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVN+PKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +KRCKHFE+GG+KK KG +
Sbjct:    1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAA 103          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_PICJA (60S ribosomal protein L44 OS=Pichia jadinii GN=RPL44 PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 4.457e-44
Identity = 82/101 (81.19%), Postives = 89/101 (88.12%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 357
            MVNVPKT++TYCK KECRKHT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK  +Q  +KRCKHFE+GGDKK KG
Sbjct:    1 MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKG 101          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_PICCI (60S ribosomal protein L44 OS=Pichia ciferrii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 4.457e-44
Identity = 82/101 (81.19%), Postives = 89/101 (88.12%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 357
            MVNVPKT+KTYCK KECRKHT HKVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK  +Q  +KRCKHFE+GGD+K KG
Sbjct:    1 MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKG 101          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_DEBHA (60S ribosomal protein L44 OS=Debaryomyces hansenii GN=RPL44 PE=3 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 1.297e-43
Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 357
            MVNVPKT++TYCK KECRKHT HKVTQYK GK SL AQGKRRYDRKQ GYGGQTKPVFHKKAKTTKK+VLRL+C  CK  +Q  +KRCKHFE+GGDKK KG
Sbjct:    1 MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQKGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKG 101          
BLAST of EY666517 vs. ExPASy Swiss-Prot
Match: RL44_CANGY (60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 1.694e-43
Identity = 80/103 (77.67%), Postives = 89/103 (86.41%), Query Frame = 1
Query:   55 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 363
            MVNVPKT+KTYCK K+C+KHT HKVTQYK GK SL +QGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +KRCKHFE+GGDKK KG +
Sbjct:    1 MVNVPKTRKTYCKGKQCKKHTQHKVTQYKAGKASLYSQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGAA 103          
The following BLAST results are available for this feature:
BLAST of EY666517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RL44_GOSHI2.061e-57100.0060S ribosomal protein L44 OS=Gossypium hirsutum GN... [more]
RL36A_ARATH8.104e-5493.2060S ribosomal protein L36a OS=Arabidopsis thaliana... [more]
RL44_PHARH5.265e-4578.6460S ribosomal protein L44 OS=Phaffia rhodozyma GN=... [more]
RL44_CRYNE8.981e-4578.6460S ribosomal protein L44 OS=Cryptococcus neoforma... [more]
RL44_COPCI3.413e-4476.7060S ribosomal protein L44 OS=Coprinopsis cinerea G... [more]
RL44_COPC73.413e-4476.7060S ribosomal protein L44 OS=Coprinopsis cinerea (... [more]
RL44_PICJA4.457e-4481.1960S ribosomal protein L44 OS=Pichia jadinii GN=RPL... [more]
RL44_PICCI4.457e-4481.1960S ribosomal protein L44 OS=Pichia ciferrii GN=RP... [more]
RL44_DEBHA1.297e-4380.2060S ribosomal protein L44 OS=Debaryomyces hansenii... [more]
RL44_CANGY1.694e-4377.6760S ribosomal protein L44 OS=Candida glycerinogene... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666517 ID=EY666517; Name=EY666517; organism=Citrus sinensis; type=EST; length=485bp
CCACGCGTCCGGTTACGAAGAGCTCTCACCTCCTCGTCGCCGCCGCCGGC
CATCATGGTGAACGTTCCCAAGACTAAGAAGACCTACTGCAAGAGCAAGG
AGTGCAGAAAGCACACCTTGCACAAGGTGACACAGTACAAGAAGGGCAAG
GACAGTCTTGCTGCTCAAGGGAAGAGACGGTATGATCGTAAACAGTCTGG
CTATGGTGGTCAGACCAAGCCTGTCTTCCACAAGAAGGCTAAGACCACCA
AGAAGATTGTGCTGAGGCTCCAATGCCAGGGTTGCAAGCATGTGTCTCAA
CATCCCATCAAGAGGTGCAAGCACTTTGAAATTGGTGGAGACAAGAAGGG
AAAGGGAACATCTCTTTTCTAAATGCCTTTATTTTTGTTTGTATGCTTTT
TACTTTGCTGCACTTGATGGAACTTTACCCAGTATGAGAATATTTGTTTT
AGTTTTGTTGGGTTAAAAAAAAAAAAAAAAAAAAA
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