EY666511

Overview
NameEY666511
Unique NameEY666511
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666511 vs. ExPASy Swiss-Prot
Match: UP12_ORYSJ (Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 5.699e-51
Identity = 94/124 (75.81%), Postives = 110/124 (88.71%), Query Frame = 2 
Query:  320 SSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPEVLEAIRLTVINNLLQYHPESSS 691
            SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LLDTMNALKNLGLNVVKA+V LDS+GKH K AITK  TGRK+ +PE+LEA+RLT+INN++QYHPE+SS
Sbjct:   48 SSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPELLEAVRLTIINNMIQYHPEASS 170

HSP 2 Score: 28.8758 bits (63), Expect = 5.699e-51
Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  750 LSTPIRVFDGGPNQVLLLGETVVQPGL 830
            ++T I ++D GP++ LL+ ET  +PGL
Sbjct:  191 IATHIDIYDDGPDRSLLVVETADRPGL 217

HSP 3 Score: 26.1794 bits (56), Expect = 5.699e-51
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 1 
Query:  676 PGIKFQLAMGGCFGVDPPKNPGDGDLA 756
            P    QLA+G  FG +PP    D D+A
Sbjct:  166 PEASSQLALGATFGPEPPTELVDVDIA 192
[Close]
BLAST of EY666511 vs. ExPASy Swiss-Prot
Match: UP12_ORYSI (Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_027381 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 5.699e-51
Identity = 94/124 (75.81%), Postives = 110/124 (88.71%), Query Frame = 2 
Query:  320 SSSATRIIPRASSATAVEDGSNGDTDTIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKADTGRKVDDPEVLEAIRLTVINNLLQYHPESSS 691
            SS A R+ PRA+S+ AVEDGS+ +TDT+PTPKVIID DSDPDATIVEIT GDRLG LLDTMNALKNLGLNVVKA+V LDS+GKH K AITK  TGRK+ +PE+LEA+RLT+INN++QYHPE+SS
Sbjct:   48 SSPAVRV-PRAASSAAVEDGSSSNTDTVPTPKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEPELLEAVRLTIINNMIQYHPEASS 170

HSP 2 Score: 28.8758 bits (63), Expect = 5.699e-51
Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  750 LSTPIRVFDGGPNQVLLLGETVVQPGL 830
            ++T I ++D GP++ LL+ ET  +PGL
Sbjct:  191 IATHIDIYDDGPDRSLLVVETADRPGL 217

HSP 3 Score: 26.1794 bits (56), Expect = 5.699e-51
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 1 
Query:  676 PGIKFQLAMGGCFGVDPPKNPGDGDLA 756
            P    QLA+G  FG +PP    D D+A
Sbjct:  166 PEASSQLALGATFGPEPPTELVDVDIA 192
The following BLAST results are available for this feature:
BLAST of EY666511 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UP12_ORYSJ5.699e-5175.81Unknown protein DS12 from 2D-PAGE of leaf, chlorop... [more]
UP12_ORYSI5.699e-5175.81Unknown protein DS12 from 2D-PAGE of leaf, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666511 ID=EY666511; Name=EY666511; organism=Citrus sinensis; type=EST; length=832bp
TCTTAACCCATCTCTACTTTCTTCTTTCTCTTCAGTTTTCACTCCGCCCA
TTTCTTGAGACACTCTTTACTCTCTGATTTGGGTTCTTTTCACTTTGCTT
ATTCTCTTTAGTAGTCACTATCTTTGTCTGTCTCTTTTCTTATTAGAGTT
TTTTTTTTTTCAAAAAAAAAAAAAAATGGCTGTGGCTATGGGTTCTGCTT
CTGTGCATTTAGCTGTTCAGATCTGTTGTAATAATGAATTTAAAGCTAAT
GCTGCATTTGTTAAAGGCTCTCCCCGTTTTGGTAACAAACCACTTTGCTG
TCCTGCCAGGAGAACATTCTCATCTTCAGCAACTAGAATAATTCCTCGAG
CCTCCTCAGCTACAGCTGTGGAGGATGGAAGTAATGGTGACACTGATACA
ATTCCGACTCCCAAAGTCATAATAGACCTAGATTCTGACCCGGATGCAAC
CATAGTGGAGATAACCTTTGGCGATCGCCTTGGAGCTCTTCTTGATACTA
TGAACGCACTTAAGAACCTTGGGCTGAATGTTGTCAAGGCAAATGTTTTT
TTGGATTCTTCTGGGAAGCACAACAAGTTTGCCATTACCAAAGCTGATAC
TGGTAGGAAAGTTGATGATCCTGAGGTGCTTGAGGCAATTCGTTTGACAG
TTATAAACAATCTACTTCAGTATCACCCGGAATCAAGTTCCAGTTAGCAA
TGGGGGGTTGCTTTGGCGTTGATCCTCCCAAAAACCCGGGTGATGGTGAC
TTAGCACCCCCATAAGGGTTTTTGATGGTGGGCCCAACCAAGTTTTGCTT
TTGGGGGAAACGGTGGTTCAACCTGGATTATT
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