CN185085

Overview
NameCN185085
Unique NameCN185085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_MOUSE (Major facilitator superfamily domain-containing protein 5 OS=Mus musculus GN=Mfsd5 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39
Identity = 86/203 (42.36%), Postives = 124/203 (61.08%), Query Frame = 1
Query:   40 YLVFXXXXXXXXXXELSKTNK---DRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 636
            YL F          ELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK++CV + LTY L CITK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+ +G+    +     LGPVAPF AA
Sbjct:    6 YLSFVGLLASCLGLELSRCRARPPGRACSNPSFLQFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCITKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAF-WNHVLAVAAGVAAEAVASWIGLGPVAPFVAA 207          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_HUMAN (Major facilitator superfamily domain-containing protein 5 OS=Homo sapiens GN=MFSD5 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39
Identity = 85/203 (41.87%), Postives = 124/203 (61.08%), Query Frame = 1
Query:   40 YLVFXXXXXXXXXXELSKTNKD---RINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 636
            YL F          ELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK +CV + LTY L C+TK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+++G+    +     LGPVAPF AA
Sbjct:    6 YLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAF-WNHVLAVVAGVAAEAVASWIGLGPVAPFVAA 207          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_PONAB (Major facilitator superfamily domain-containing protein 5 OS=Pongo abelii GN=MFSD5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38
Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 1
Query:   40 YLVFXXXXXXXXXXELSKTNKD---RINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 636
            YL F          ELS+       R  ++ +F   + ++  VY L +A DWLQ PY+Y LY  Y F +G+I  L++ G  S++LFG +  SL D  GRK +CV + LTY L C+TK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+++G+    +     LGPVAPF AA
Sbjct:    6 YLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRSQLDFYQVYFLALAADWLQAPYLYKLYQHYYFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLSTALLFSAFEAWYIHEHVERHDFPTEWIPATFARAAF-WNHVLAVVAGVAAEAVASWIGLGPVAPFVAA 207          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_BOVIN (Major facilitator superfamily domain-containing protein 5 OS=Bos taurus GN=MFSD5 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38
Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 1
Query:   40 YLVFXXXXXXXXXXELSKTN---KDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 636
            YL F          ELS+       R  ++ +F  F+ ++  VY L +A DWLQ PY+Y LY  Y F + +I  L++ G  S++LFG +  SL D  GRK++CV + LTY L C+TK S  Y +L++GR LGG++T+LLFSAFE+W + EH +R  F  +W+  TF++A F  N ++A+ +G+    +     LGPVAPF AA
Sbjct:    6 YLAFVVLLASCLGLELSRCRAKPSGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHYHFLEAQIAILYVCGLASTVLFGLVASSLVDWLGRKKSCVLFSLTYSLCCLTKLSRDYFVLLVGRALGGLSTALLFSAFEAWYIHEHLERHDFPTEWIPATFARAAF-WNHVLAVAAGVAAEAVACWMGLGPVAPFVAA 207          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_TAKRU (Major facilitator superfamily domain-containing protein 5 OS=Takifugu rubripes GN=mfsd5 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.662e-35
Identity = 75/169 (44.38%), Postives = 105/169 (62.13%), Query Frame = 1
Query:  124 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 627
            AF  F+  +L  Y L +  DWLQGPY+Y LY  Y F + +I  L++ G  S +LF    G L+   GR+  C+ +CL+Y   C+TK S  Y +L++GRILGG++TSLL + FESW V  H +   F ++W+  TF+KA    +GL A+ +GL  NLL +   LGPVAPF
Sbjct:   38 AFRRFQATFLRAYLLALWADWLQGPYLYKLYRHYSFLESQIAILYVCGLASCVLFAPFSGWLSQALGRRHMCIFFCLSYATCCLTKLSRDYFVLIVGRILGGLSTSLLTTTFESWYVHHHVEIHDFPKEWIPTTFTKAATWNHGL-AVGAGLVANLLAEWLHLGPVAPF 205          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_DANRE (Major facilitator superfamily domain-containing protein 5 OS=Danio rerio GN=mfsd5 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.346e-34
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 1
Query:  124 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 627
            AF  F+  +L  Y L +  DWLQGPY+Y LY  Y F + +I  L++ G  S +LF  + G L    GR++ C+ +CL Y + CITK S  Y +L++GR+LGG++TSLL + FE+W V  H +   F ++W+ +TF K      GL A+ +GL  NL  +   LGPVAPF
Sbjct:   40 AFQRFQKLFLKAYLLALWADWLQGPYLYKLYRHYNFLESQIAILYVCGLASCVLFAPVAGWLPQFLGRRQTCLLFCLAYSVCCITKLSQDYFMLILGRVLGGLSTSLLTTTFEAWYVHGHVDIHDFPKEWIPVTFGKVANWNYGL-AVGAGLVANLFAEWLGLGPVAPF 207          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_XENLA (Major facilitator superfamily domain-containing protein 5 OS=Xenopus laevis GN=mfsd5 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 67/168 (39.88%), Postives = 103/168 (61.31%), Query Frame = 1
Query:  124 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 624
            AF  F+ ++   Y   +A DWLQGPY+Y LY  Y F +G+I  +++ GFG+S+  G +   L  + GR+++C+ +CL    S + K S +Y +LM GR+LGG ++SLLFS FE+W   EH  +  F  +WL  TF++A    NG +AI +G+  N+  +   LGP +P
Sbjct:   39 AFRQFQYDFYRTYFPALAADWLQGPYLYKLYQHYHFLEGQIAIIYVCGFGASVFAGLVSVPLTSRLGRRKSCILFCLLLSASYLCKLSQEYFVLMTGRVLGGFSSSLLFSCFEAWYTHEHAEQHDFPAEWLPHTFTRAA-AWNGGIAIAAGITANVCAEWLGLGPASP 205          
BLAST of CN185085 vs. ExPASy Swiss-Prot
Match: MFSD5_XENTR (Major facilitator superfamily domain-containing protein 5 OS=Xenopus tropicalis GN=mfsd5 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 66/168 (39.29%), Postives = 103/168 (61.31%), Query Frame = 1
Query:  124 AFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 624
            AF  F+ ++   Y   +A DWLQGPY+Y LY  Y F +G+I  +++ GFG+S+  G +   L  + GR+++C+ +CL    S + K S +Y +L+ GR+LGG ++SLLFS+FE+W   EH  +  F  +WL  TF++A    NG +AI +G+  N   +   LGP +P
Sbjct:   39 AFRQFQYDFYRTYFPALAADWLQGPYLYKLYQHYHFLEGQIAIIYVCGFGASVFAGLVSAPLTSRLGRRKSCILFCLLLSASYLCKLSQEYFVLITGRVLGGFSSSLLFSSFEAWYTHEHAEQHDFPAEWLPHTFTRAA-AWNGGIAIAAGVIANACAEWLGLGPASP 205          
The following BLAST results are available for this feature:
BLAST of CN185085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MFSD5_MOUSE2.478e-3942.36Major facilitator superfamily domain-containing pr... [more]
MFSD5_HUMAN4.226e-3941.87Major facilitator superfamily domain-containing pr... [more]
MFSD5_PONAB3.578e-3841.38Major facilitator superfamily domain-containing pr... [more]
MFSD5_BOVIN3.578e-3841.38Major facilitator superfamily domain-containing pr... [more]
MFSD5_TAKRU1.662e-3544.38Major facilitator superfamily domain-containing pr... [more]
MFSD5_DANRE5.346e-3442.60Major facilitator superfamily domain-containing pr... [more]
MFSD5_XENLA2.246e-3239.88Major facilitator superfamily domain-containing pr... [more]
MFSD5_XENTR2.934e-3239.29Major facilitator superfamily domain-containing pr... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006L11_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185085 ID=CN185085; Name=CN185085; organism=Citrus sinensis; type=EST; length=694bp
GAGGTATCACTCTGGCGAGCAAAAATGGAGATGTTTTTTTATCTGGTGTT
TGGTGCGTTGGGTGCAGTGGTGGCTGCATTGGAGCTGAGTAAAACCAACA
AAGATAGAATCAATACTTCATCGGCTTTCAATTCTTTCAAGAACAATTAC
CTTTTGGTTTACTCACTCATGATGGCTGGGGATTGGTTGCAGGGTCCTTA
TGTCTACTACCTCTATAGTACTTATGGATTTGGAAAAGGGGAGATTGGGC
AGCTATTTATAGCTGGTTTTGGGTCCTCCATGTTGTTCGGCACAATTGTC
GGATCTCTAGCTGACAAACAGGGTCGAAAGAGGGCATGCGTGACGTATTG
CCTAACATACATTCTAAGCTGCATCACTAAGCATTCTCCTCAATACAAAA
TTCTGATGATAGGTCGTATTTTGGGAGGTATCGCAACTTCTCTCTTATTT
TCAGCATTTGAGTCATGGCTTGTTGCAGAGCACAACAAGAGGGGCTTTGA
GCAACAATGGCTGTCTATAACATTCTCAAAGGCAATATTTCTTGGAAATG
GTCTTGTTGCTATTTTGTCTGGATTGTTTGGAAACCTTCTTGTTGATTCA
TTTTCCCTCGGGCCTGTGGCCCCCTTTGATGCTGCTGCTTTGCTTTCTCG
CGATTGAAATGGTCATTATTTTTGTCTTCTTGGACCGAAAACTA
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