CN185072

Overview
NameCN185072
Unique NameCN185072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185072 vs. ExPASy Swiss-Prot
Match: NCPR_CATRO (NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.548e-40
Identity = 95/192 (49.48%), Postives = 114/192 (59.38%), Query Frame = 3
Query:   96 KVSPFDLMSAIIRSGKXXXXXXXXXXXXXXXXXXX--LDNKEFVMILTTSIAVLIGCVVVFILRRXXXXXXXXXXXXXXXXXXXXXXXX--DDGKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFFFLATYGDGEPTDNAARFYKWFTE-KEGGECLQKLKY 656
            K+SPF+LMSAI++  K                     L+NKE VMILTTS+AVLIGCVVV I RR                          D+GK+K TIFFGTQTGTAEGFAKALA+EA+ARY+KA+ KV+              K +KE + FF LATYGDGEPTDNAARFYKWF E  + G+ L+ L+Y
Sbjct:    7 KLSPFELMSAILKGAKLDGSNSSDSGVAVSPAVMAMLLENKELVMILTTSVAVLIGCVVVLIWRRSSGSGKKVVEPPKLIVPKSVVEPEEIDEGKKKFTIFFGTQTGTAEGFAKALAEEAKARYEKAVIKVIDIDDYAADDEEYEEKFRKETLAFFILATYGDGEPTDNAARFYKWFVEGNDRGDWLKNLQY 198          
BLAST of CN185072 vs. ExPASy Swiss-Prot
Match: NCPR_PHAAU (NADPH--cytochrome P450 reductase OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30
Identity = 78/151 (51.66%), Postives = 92/151 (60.93%), Query Frame = 3
Query:  219 VMILTTSIAVLIGCVVVFILRRXXXXXXXXXXXXXXXXXXXXXXXXDD---GKQKVTIFFGTQTGTAEGFAKALADEARARYDKAIFKVVXXXXXXXXXXXXXXKLKKENIVFFFLATYGDGEPTDNAARFYKWFTE--KEGGECLQKLKY 656
            ++I TTS AV++G ++VF+ ++                         D   GK KVTIFFGTQTGTAEGFAKALA+E +ARY+KA  KVV              KLKKE++VFF LATYGDGEP DNAARFYKWFTE   E G  LQKL Y
Sbjct:   28 LLIATTSAAVVVG-LLVFLWKKSSDRSKEVKPVVVPRDLMMEEEEEVDVAAGKTKVTIFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAADDDLYEEKLKKESLVFFMLATYGDGEPIDNAARFYKWFTEGKDERGIWLQKLTY 177          
The following BLAST results are available for this feature:
BLAST of CN185072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NCPR_CATRO1.548e-4049.48NADPH--cytochrome P450 reductase OS=Catharanthus r... [more]
NCPR_PHAAU5.518e-3051.66NADPH--cytochrome P450 reductase OS=Phaseolus aure... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0006L01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185072 ID=CN185072; Name=CN185072; organism=Citrus sinensis; type=EST; length=658bp
GGGGGTTCTTCTCTTCTCCCGTTCCATTTCCACTCGCTCTCCGACAAATT
CATACTATGCAATCATCGTCGTCGTCATCAGAATCAGGCACGATGAAAGT
ATCGCCGTTCGACTTGATGTCCGCGATCATCAGAAGTGGCAAGGTCGATC
CGTCCAACGTGTCGTCGTCCGGTTCAGGAGTTGAAGTTGCTTCGATTGTG
CTCGACAATAAGGAGTTCGTTATGATCTTGACCACGTCTATTGCCGTCCT
CATCGGCTGCGTCGTCGTTTTTATTTTGCGGAGATCTAGTAGCTCCAAGC
CGAAGAAGGTTGAGCCGCTCAAGCCTTTGGTTGTTAAGGAGCCGGAAGTT
GAGGTCGATGATGGAAAGCAGAAGGTCACTATCTTCTTCGGTACTCAAAC
TGGCACAGCTGAAGGATTTGCTAAGGCTTTAGCTGACGAAGCCAGGGCTC
GATATGATAAGGCCATTTTTAAAGTCGTCGATATTGATGATTACGCCGAC
GAGGAAGATGAATATGAAGAGAAATTGAAGAAAGAGAATATAGTATTTTT
CTTCTTGGCTACATATGGAGATGGTGAGCCAACCGACAATGCAGCTAGGT
TCTATAAATGGTTTACGGAGAAAGAGGGAGGGGAGTGTTTACAGAAGCTG
AAGTATGG
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