EY666504

Overview
NameEY666504
Unique NameEY666504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666504 vs. ExPASy Swiss-Prot
Match: Y1934_ARATH (Uncharacterized protein At1g09340, chloroplastic OS=Arabidopsis thaliana GN=At1g09340 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.618e-58
Identity = 111/150 (74.00%), Postives = 129/150 (86.00%), Query Frame = 1 
Query:    1 SDEEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCETDAVDPKSRHKGKLNTESVLESKSVNWTSLRPVYIYGPLELPTLLKKGFFPPFENRSPHFQSPASGIKVN 450
            SD++FA+FSSKILHLKGDRKDYDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE DAVDPKSRHKGKL TES+L+SK VNWTS+RPVYIYGPL     +++ FF   +   P    P SGI+++
Sbjct:   98 SDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNY-NPVEEWFFHRLKAGRP-IPVPNSGIQIS 245
The following BLAST results are available for this feature:
BLAST of EY666504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1934_ARATH2.618e-5874.00Uncharacterized protein At1g09340, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666504 ID=EY666504; Name=EY666504; organism=Citrus sinensis; type=EST; length=497bp
TCAGACGAGGAATTCGCCGAATTTTCTTCCAAGATCTTGCATTTGAAAGG
AGACAGAAAGGACTATGATTTTGTGAAATCCAGCCTCTCTGCCAAAGGCT
TTGATGTTGTTTATGATATAAATGGACGAGAGGCAGATGAAGTCGAACCC
ATATTGGATGCACTGCCAAATCTAGAACAGTTCATCTACTGCTCCTCAGC
TGGTGTTTATCTAAAATCTGACCTTTTACCACACTGTGAGACCGACGCTG
TTGATCCAAAGAGCAGGCACAAGGGAAAGCTTAATACAGAGTCCGTACTG
GAATCAAAAAGCGTGAACTGGACTTCTTTAAGGCCAGTCTATATATATGG
TCCCCTTGAACTACCAACCCTGTTGAAAAAGGGGTTCTTCCCCCCGTTTG
AAAACAGGTCGCCCCATTTCCAATCCCCGGCCTCCGGAATAAAAGTAAAC
CCACCTTGGGTCATGGAAAAGGAACTTGGCTAAGGGCCTTTTGTTCA
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