EY666491

Overview
NameEY666491
Unique NameEY666491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length653
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY666491 vs. ExPASy Swiss-Prot
Match: TXLA_SYNY3 (Thiol:disulfide interchange protein txlA homolog OS=Synechocystis sp. (strain PCC 6803) GN=txlA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.853e-24
Identity = 56/127 (44.09%), Postives = 75/127 (59.06%), Query Frame = 2 
Query:   14 TVLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALARGKASIPHARIVGQYSSAENRKVH-QVVDPRSHG*R*PS 391
            T++EFYADWC  C+ +APD+  +++ Y   VNF MLNVDN KW  E+  + V+GIPHF +LD  G      +G  P + L +N+ AL      IP+A + GQ S  ENR +      PRSHG   PS
Sbjct:   55 TLVEFYADWCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLRYRVDGIPHFVYLDDTGTAIAESIGEQPLRVLEQNITALV-AHEPIPYANVTGQTSVVENRTIEADPTSPRSHGNPRPS 180
[Close]
BLAST of EY666491 vs. ExPASy Swiss-Prot
Match: TXLA_SYNE7 (Thiol:disulfide interchange protein txlA OS=Synechococcus elongatus (strain PCC 7942) GN=txlA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 2 
Query:   17 VLEFYADWCEVCRELAPDVYRVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLLENVDALARGKASIPHARIVG---QYSSAENRKVHQVVDPRSH 373
            +LEFYADWC  C+ +A  +  ++Q Y DR++FVMLN+DN KW  E+ ++ V+GIP F +L+ +G  +G  +G LPR  L  N+DAL   +  +P+    G   ++S+          DPRSH
Sbjct:   61 LLEFYADWCTSCQAMAGRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVDGIPQFVYLNGQGQPQGISIGELPRSVLAANLDALVEAQ-PLPYTNARGNLSEFSADLQPSRSSQTDPRSH 181
The following BLAST results are available for this feature:
BLAST of EY666491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TXLA_SYNY35.853e-2444.09Thiol:disulfide interchange protein txlA homolog O... [more]
TXLA_SYNE73.551e-2140.16Thiol:disulfide interchange protein txlA OS=Synech... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666491 ID=EY666491; Name=EY666491; organism=Citrus sinensis; type=EST; length=653bp
CCACGCGTCCGCCACTGTTCTAGAGTTCTATGCAGATTGGTGTGAAGTAT
GTAGAGAATTAGCTCCAGATGTATACAGAGTTGAACAGCAATACAAGGAC
CGTGTGAATTTTGTTATGCTGAATGTTGACAACACGAAATGGGAGCAAGA
ACTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCGTTTCTGGACA
GAGAGGGGAATGAGGAGGGTAATGTTGTAGGTAGACTTCCAAGGCAGTAC
CTGCTTGAGAATGTGGATGCCCTTGCCCGTGGAAAAGCATCAATTCCTCA
TGCTCGCATTGTGGGGCAGTATTCAAGTGCTGAAAACAGGAAGGTCCATC
AAGTTGTTGATCCCAGAAGTCATGGGTAGAGGTGACCTTCCTTTTGAAAA
GTGACCGATCAATTTTGTCACTGGAAATAAGCACACAAGCTTATTTTATT
CGAACTCATTGATAGGATCATCACATCCCAAGTTTCTAGCAAATTTGTAC
TGTAATGAGTAATGTCATCTGGCAGTCACTGATAGGGAAGACCTTCGAAG
AGAAGCAGGTTCATACCACTTGACTTGATTGATTAAGGCATTTGTACCTG
GGAGTCTTCACTCCCAATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
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