CN184953

Overview
NameCN184953
Unique NameCN184953
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.866e-51
Identity = 93/119 (78.15%), Postives = 113/119 (94.96%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            TAGVKN+ITITNDKGRLSKE+IE+MV++AE+YKAEDE+VKKKVEAKN LENYAY+MRNT+KD+K+ GKL+  +KQKIEKAV++ ++WL+GNQ+AEVDEFEDK KELEG+CNPIIAKMYQ
Sbjct:  499 TAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQ 617          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.169e-50
Identity = 94/119 (78.99%), Postives = 110/119 (92.44%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            TAGVKN+ITITND GRLSK++IE++V+EAEKYKAEDE+VKKKVEAKN LENYAY+MRNT+KDDK+ GKL A DK+KIE AV+E +EWL+ NQLAEVDE EDKLKELEGLCNPIIA++YQ
Sbjct:  502 TAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQ 620          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.138e-50
Identity = 93/119 (78.15%), Postives = 109/119 (91.60%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+ITITNDKGRLSKE+IE+MVQEAEKYKAEDE++KKKVEAKN LENYAY+MRNTVKD+K+  KL++ DK+KIE AVD+ + WL+ NQLAEVDEFEDK+KELEG+CNPIIAKMYQ
Sbjct:  502 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQ 620          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.405e-50
Identity = 92/119 (77.31%), Postives = 109/119 (91.60%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+ITITNDKGRLSKE+IERMVQEAEKYK+EDE++KKKVEAKN LENYAY+MRNT+KDDK+  +L+AADK++IE A+DE ++WLD NQLAE DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQ 618          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 5.405e-50
Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = -1
Query:  253 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 606
            T G KN+ITITNDKGRLSKE+IE+MVQEAEKYKAEDE+VKKKV+AKN LENYAY+MRNT+KDDK+A KL A DK+KIE AVD  + WLD NQLAEV+EFEDK+KELEG+CNPIIAKMY
Sbjct:  496 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMY 613          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.019e-48
Identity = 90/119 (75.63%), Postives = 108/119 (90.76%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+ITITNDKGRLSKE+IE+MVQEAEKYK+EDE+ KKKVEAKN LENYAY+MRNT+KD+K+A KL+A D+ KIE A+++ ++WLDGNQLAE +EFEDK+KELE LCNPIIAKMYQ
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQ 618          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.019e-48
Identity = 89/119 (74.79%), Postives = 107/119 (89.92%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+ITITNDKGRLSKEDIE+MVQEAEKYK+EDE+ KKKVEAKN LENYAY+MRNT++D+K+  KL AADK+K+E +++E ++WLDGNQL E DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  500 TTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQ 618          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.127e-47
Identity = 88/119 (73.95%), Postives = 107/119 (89.92%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+I ITNDKGRLSKE+IE+MVQEAEKYK+EDE+ KKKVE+KN LENYAY+MRN VKD+K+  KL+ ADK+KIE+A+D +++WLDGNQLAE DEF+DK+KELE +CNPIIAKMYQ
Sbjct:  500 TTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQ 618          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.127e-47
Identity = 87/119 (73.11%), Postives = 108/119 (90.76%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+ITITNDKGRLSK++IE+MVQEAEKYK+EDE+ KKKVEAKN LENYAY+MRNT++D+K+  KL AADK+KIE ++++ ++WL+GNQLAE DEFEDK+KELE +CNPIIAKMYQ
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQ 618          
BLAST of CN184953 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.125e-46
Identity = 90/119 (75.63%), Postives = 100/119 (84.03%), Query Frame = -1
Query:  250 TAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 606
            T G KN+ITITNDKGRLSKEDIE+MVQE EKYKAEDE+VKKKV+ KN LENYAYSMRNT+ DDK+  KL   DK+KIE  VD  +  LDGNQL EV+EFEDK+KELE LCNPIIAKMYQ
Sbjct:  108 TTGQKNKITITNDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELESLCNPIIAKMYQ 226          
The following BLAST results are available for this feature:
BLAST of CN184953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP70_SOYBN2.866e-5178.15Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA3.169e-5078.99Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP71_SOLLC4.138e-5078.15Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7C_PETHY5.405e-5077.31Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP70_MAIZE5.405e-5079.66Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP72_SOLLC1.019e-4875.63Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP72_ARATH1.019e-4874.79Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP7E_SPIOL1.127e-4773.95Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP71_ARATH1.127e-4773.11Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP70_LUPPO2.125e-4675.63Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0006G23_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0006G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN184953 ID=CN184953; Name=CN184953; organism=Citrus sinensis; type=EST; length=606bp
AAAATTACATCCGTAACATTATTTATATTTATCTCTCAAACGATTCCTAA
ACCTTTGCATCATTTGACAACACACACCATCATAAGAAAAAACAGAGCAG
AAGGAACGGAACATAGCAGGAAGGACTTCCCTAGCGACAACGTTTTAACT
TCAATCAACTTCCTCAATCTTAGGCCCAGCACCGGCACCAGAACCACCAG
ACCCGGAGGAGCCATAGCCGCCACCCATTGGAACATCCCCACCGTCACCT
TGATACATCTTTGCTATTATGGGATTGCACAAGCCCTCCAACTCCTTCAA
CTTGTCCTCGAACTCATCAACTTCAGCCAGTTGATTCCCGTCAAGCCACT
CGACAGTCTCATCAACTGCCTTCTCAATCTTTTGCTTGTCTGCTGCGGCC
AATTTTCCTGCAACCTTGTCATCCTTCACTGTATTCCTCATACTGTACGC
GTAATTCTCTAACTTGTTCTTCGCCTCCACCTTCTTCTTCACTTGTTCAT
CTTCAGCCTTGTACTTCTCTGCCTCTTGCACCATCCTCTCGATATCTTCC
TTGCTCAATCTTCCCTTATCATTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGT
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