EY666485

Overview
NameEY666485
Unique NameEY666485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.032e-41
Identity = 89/163 (54.60%), Postives = 103/163 (63.19%), Query Frame = 1
Query:  133 SNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGNXXXXXXXXXXXXXXXXXEHKPSL---GPAPFILGKRVRSDDDGTKGEDSIS 612
            +N+DG     SNGA+I+   QQP    ++ VKKPP+KDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE               FST SVS+RG  N                 +HKP+    G +PFILGKRVR+D+D     +  S
Sbjct:   12 NNNDGLMIS-SNGALIE---QQP----SVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASVSIRGATN-------------STSLDHKPTSLLGGTSPFILGKRVRADEDSNNSHNHSS 153          

HSP 2 Score: 38.891 bits (89), Expect = 6.032e-41
Identity = 16/28 (57.14%), Postives = 19/28 (67.86%), Query Frame = 3
Query:  633 GADSGPCDSGGGFWALPARAEFGQVWSF 716
            G D     +  GFWA+PAR +FGQVWSF
Sbjct:  155 GKDETFTTTPAGFWAVPARPDFGQVWSF 182          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP21_ARATH (Transcription factor TCP21 OS=Arabidopsis thaliana GN=TCP21 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.456e-38
Identity = 88/182 (48.35%), Postives = 100/182 (54.95%), Query Frame = 1
Query:  130 MSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGNXXXXXXXXXXXXXXXXXEHKPSLGPAPFILGKRVRSDDDGTKGEDSISGVGPATVGPIVGPATQVAGSG 675
            M+++DGA   VSNG I++    + P N    VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE               FST S+S                               +PF LGKRV   ++G  G     G G  TVG  +G  T + G G
Sbjct:    1 MADNDGA---VSNGIIVEQTSNKGPLNA---VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTASLST-----------------------------SSPFTLGKRVVRAEEGESGG---GGGGGLTVGHTMG--TSLMGGG 142          

HSP 2 Score: 45.0542 bits (105), Expect = 3.456e-38
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 3
Query:  663 GGFWALPARAEFGQVWSFPAPAAPE 737
            GGFWA+PAR +FGQVWSF   A PE
Sbjct:  145 GGFWAVPARPDFGQVWSFATGAPPE 169          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23
Identity = 62/121 (51.24%), Postives = 74/121 (61.16%), Query Frame = 1
Query:  112 ILPGAHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVK---KPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGG 465
            I  G H + S  AT+  S  +          G+    VK   K P+KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE               FST++ S+R GG
Sbjct:   28 ISSGQHGNISTSATSSTSTSS----------GSALAVVKSAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNASLRSGG 138          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.679e-23
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 1
Query:  133 SNSDGATNGVSNGA--IIDPQ-----RQQPPGNGAL---------TVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 468
            +N+D A      GA  ++D       R  PP +  L         T  K  +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE               FST+SVS+R  G+
Sbjct:    9 NNNDTAAVATGGGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGS 136          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP23_ARATH (Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.969e-23
Identity = 59/115 (51.30%), Postives = 69/115 (60.00%), Query Frame = 1
Query:  124 AHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 468
            AH+  S G  +G  +     P         A T  K PSKDRH KVDGRGRRIRMP ICAARVFQLTREL HKSDG+TIEWLL+QAE                ST+++S+R  G+
Sbjct:   17 AHLVPSMGPISGSVSLTTTAPNSTTTTVTAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIPANISTLNISLRSSGS 131          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.600e-22
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  208 NGALTVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 468
            +  +  KKPP     +KDRH+KVDGRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE               F+++++S+R  G+
Sbjct:  102 SAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGS 193          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.587e-21
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = 1
Query:  112 ILPGAHMSNSDGATNGVSNGAIIDPQRQQPPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVRGGGN 468
            I+P A      G     +   +   +++     GA    K P+KDRH+KV+GRGRRIRMP +CAARVFQLTRELGHK+DG+TIEWLL+QAE               FS+++VS+R   +
Sbjct:  112 IVPAAAAPGGGGGQVQAAAAPVASSEKKAVVAAGAGA--KRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGTIPANFSSLAVSLRSAAS 228          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.123e-20
Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  142 DGATNGVSNGAIIDPQRQQPPGNGALTVKKPP-----SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEXXXXXXXXXXXXXXXFSTVSVSVR 456
            D +T+  S    I     +P        KKPP     +KDRH+KV+GRGRRIRMP +CAARVFQLTRELGHKSDG+TIEWLL+QAE               F+++++S+R
Sbjct:   19 DSSTSSSSTSLAIISTTSEPNSEP----KKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLR 124          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 41/53 (77.36%), Postives = 50/53 (94.34%), Query Frame = 1
Query:  226 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 384
            K+  +KDRH+KV+GRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+QAE
Sbjct:   74 KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 126          
BLAST of EY666485 vs. ExPASy Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.521e-18
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 1
Query:  199 PPGNGALTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 384
            PP +    +K+  +KDRH+KV+GRGRRIRMP  CAAR+FQLTRELGHKSDG+TI WLL  AE
Sbjct:   62 PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAE 123          
The following BLAST results are available for this feature:
BLAST of EY666485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TCP7_ARATH6.032e-4154.60Transcription factor TCP7 OS=Arabidopsis thaliana ... [more]
TCP21_ARATH3.456e-3848.35Transcription factor TCP21 OS=Arabidopsis thaliana... [more]
TCP22_ARATH1.203e-2351.24Transcription factor TCP22 OS=Arabidopsis thaliana... [more]
TCP8_ARATH2.679e-2349.22Transcription factor TCP8 OS=Arabidopsis thaliana ... [more]
TCP23_ARATH5.969e-2351.30Transcription factor TCP23 OS=Arabidopsis thaliana... [more]
TCP14_ARATH6.600e-2255.43Transcription factor TCP14 OS=Arabidopsis thaliana... [more]
PCF3_ORYSJ5.587e-2145.38Transcription factor PCF3 OS=Oryza sativa subsp. j... [more]
TCP15_ARATH2.123e-2049.09Transcription factor TCP15 OS=Arabidopsis thaliana... [more]
TCP20_ARATH1.165e-1877.36Transcription factor TCP20 OS=Arabidopsis thaliana... [more]
TCP9_ARATH1.521e-1867.74Transcription factor TCP9 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-018-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666485 ID=EY666485; Name=EY666485; organism=Citrus sinensis; type=EST; length=854bp
CTCTAACTTTCTCTCTCTAACAAATCCAAACACATTAATCATTCACGCTC
TTTCTCTCTCTAACACTCTTTTAACTACTTCAACAAACCCTAAAGCTTTT
ATCTTCGCCAAATTCTACCTGGTGCTCATATGTCTAATTCGGACGGTGCC
ACTAACGGCGTCTCCAACGGCGCTATTATTGACCCCCAGAGACAGCAGCC
TCCTGGTAATGGCGCGTTAACCGTCAAGAAGCCGCCCTCCAAGGACCGCC
ACAGCAAGGTCGACGGCCGCGGCAGGAGAATCCGCATGCCGATCATTTGC
GCAGCGCGTGTTTTCCAGTTGACTCGCGAGCTCGGCCACAAATCCGACGG
CCAGACCATCGAGTGGCTTCTCCGCCAAGCCGAGCCCTCAATCATTGCTG
CCACGGGGACGGGTACCACTCCGGCTAGCTTCTCCACTGTCTCGGTGTCG
GTTCGCGGCGGAGGGAACTCGACTTCCTTGTCGTCGACGGTGTCTTCTTC
GGCTATCTCCGCTGCGTTGGAACATAAGCCCTCGCTGGGTCCCGCCCCGT
TCATTCTTGGAAAACGCGTGAGGTCCGACGATGATGGGACCAAAGGGGAA
GATTCCATTTCTGGCGTGGGTCCTGCCACGGTGGGGCCGATAGTGGGCCC
TGCGACTCAGGTGGCGGGTTCTGGGCTTTGCCGGCCAGGGCCGAATTTGG
GCAAGTCTGGAGTTTCCCTGCACCTGCCGCGCCGGAAAAGGGGGGGCAGG
CGGCTTCTCAACCACAACAATCTTCATCTTCAACACCCCCACCCAGTTGG
TTTATGCACAAAGCTATGGGAAAAGGGATCGGCGGGTTAAAAAGGGGGAA
ATTT
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